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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF6042 and GFF6043 are separated by 132 nucleotides
GFF6043 and GFF6044 are separated by 41 nucleotides
GFF6044 and GFF6045 are separated by 50 nucleotides
GFF6045 and GFF6046 are separated by 40 nucleotides
GFF6042 - Fatty acid desaturase (EC 1.14.19.1); Delta-9 fatty acid desaturase (EC 1.14.19.1), at 101,865 to 103,079
GFF6042
GFF6043 - tRNA/rRNA cytosine-C5-methylase, at 103,212 to 104,483
GFF6043
GFF6044 - FIG00933533: hypothetical protein, at 104,525 to 106,378
GFF6044
GFF6045 - FIG00932121: hypothetical protein, at 106,429 to 106,665
GFF6045
GFF6046 - hypothetical protein, at 106,706 to 107,032
GFF6046
Group
Condition
GFF6042
GFF6043
GFF6044
GFF6045
GFF6046
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-3.1
-0.0
-0.0
-0.1
-0.3
no phage control
no phage control
-3.5
-0.2
+0.0
+0.1
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL
-3.6
+0.0
+0.1
+0.0
-0.0
phage
phage_bap4
-3.4
+0.1
-0.1
-0.1
+0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-3.1
-0.0
+0.0
+0.1
-0.2
no phage control
no phage control
-2.9
-0.2
+0.1
-0.0
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-2.9
-0.0
+0.1
-0.0
-0.3
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-2.7
-0.1
+0.1
-0.1
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-3.2
+0.0
+0.2
-0.0
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-2.9
+0.2
+0.0
-0.2
-0.1
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-2.7
+0.1
+0.1
-0.0
-0.3
vitamin
M9 with calcium pantothenate 10 mg/mL
-3.1
-0.1
-0.1
+0.1
+0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-3.4
+0.2
+0.1
+0.1
+0.3
vitamin
M9 with Supernatant from Cyptococcus
-2.6
-0.0
-0.0
+0.2
-0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-2.7
+0.1
+0.0
+0.1
-0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-3.1
+0.1
-0.0
+0.2
+0.3
phage
phage_bap4
-2.8
-0.1
+0.1
-0.0
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL
-2.6
-0.1
+0.1
+0.0
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-2.7
+0.1
+0.0
+0.1
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-2.9
+0.1
+0.0
+0.0
+0.1
vitamin
M9 with Supernatant from Cyptococcus
-2.3
-0.3
-0.1
-0.0
+0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-2.7
+0.1
+0.1
+0.2
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-2.8
+0.1
+0.1
+0.1
+0.0
phage
phage_bap4
-2.3
-0.2
-0.0
+0.2
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-3.0
+0.3
+0.1
+0.2
+0.1
vitamin
M9 with Supernatant from Cyptococcus
-2.4
-0.1
-0.0
-0.1
+0.3
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
-2.4
-0.0
+0.1
+0.2
-0.1
vitamin
M9 with Supernatant from Cyptococcus
-2.7
-0.1
+0.1
+0.1
+0.3
phage
phage_bap4
-2.5
-0.1
+0.0
+0.0
+0.4
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-2.7
+0.5
-0.0
+0.0
+0.2
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