Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF6008 and GFF6009 are separated by 13 nucleotidesGFF6009 and GFF6010 are separated by 10 nucleotidesGFF6010 and GFF6011 are separated by 6 nucleotidesGFF6011 and GFF6012 are separated by 111 nucleotides GFF6008 - Citrate synthase (si) (EC 2.3.3.1), at 67,818 to 68,603 GFF6008 GFF6009 - Acyl-CoA dehydrogenase STM0857, at 68,617 to 69,780 GFF6009 GFF6010 - MmgE/PrpD family protein, at 69,791 to 71,152 GFF6010 GFF6011 - putative decarboxylase, at 71,159 to 71,866 GFF6011 GFF6012 - Tricarboxylate transport protein TctC, at 71,978 to 72,982 GFF6012
Group Condition GFF6008 GFF6009 GFF6010 GFF6011 GFF6012
complex community Community=guar; Passage=4 -2.8 +0.3 +0.0 -1.5 -2.3
complex community Community=arabino-guar; Passage=4 -2.6 +0.0 -0.3 +0.8 -1.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 +0.2 -0.1 +0.3 -2.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 -0.1 -0.2 -0.2 -1.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.6 +0.0 -0.1 -0.3 -1.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.8 -0.1 -0.1 +0.2 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.4 +0.1 +0.0 +0.1 -1.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.3 -0.1 -0.3 -0.2 -0.5
complex community Community=Locust bean gum; Passage=4 +0.2 +0.1 -1.6 +1.5 -1.0
no phage control no phage control -0.7 -0.1 +0.0 +0.3 -0.3
complex community Community=arabino-guar; Passage=4 +1.0 -0.6 -0.5 +0.1 -0.6
complex community Community=guar; Passage=4 +0.6 -0.6 -1.2 -0.7 +1.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.6 +0.1 +0.1 +0.4 -0.4
complex community Community=Locust bean gum; Passage=4 -1.3 +0.2 -0.3 +0.4 +0.7
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.5 -0.2 -0.6 -0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus -0.4 +0.2 -0.3 +0.5 -0.4
phage phage_bap4 +0.4 +0.0 +0.3 -0.0 -1.0
phage phage_bap4 -0.3 -0.0 +0.1 +0.6 -0.3
vitamin M9 with Supernatant from Cyptococcus -0.8 +0.0 +0.3 +0.2 +0.4
complex community Community=arabino-guar; Passage=4 +0.4 +0.3 +0.6 -1.1 -0.1
complex community Community=Locust bean gum; Passage=4 -0.6 +0.4 -1.2 +1.0 +1.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.8 +0.1 +0.1 -0.1 -0.3
complex community Community=guar; Passage=4 +0.3 -0.8 +0.2 +0.2 +0.8
complex community Community=Locust bean gum; Passage=1 +0.5 +0.2 +0.2 +0.4 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL +0.7 +0.1 -0.1 +0.2 +0.3
complex community Community=Kojac gum; Passage=1 +0.8 -0.1 -0.2 +0.0 +0.7
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.6 +0.2 +0.2 +0.1 +0.2
complex community Community=arabino-guar; Passage=4 +0.9 -0.2 +1.1 -1.3 +1.0
complex community Community=Locust bean gum; Passage=4 +0.7 -0.2 +0.4 +0.6 +0.4
complex community Community=guar; Passage=4 +0.0 +0.3 +0.5 +0.5 +1.3
remove
GFF6008
plot		 remove
GFF6009
plot		 remove
GFF6010		 remove
GFF6011
plot		 remove
GFF6012
plot