Fitness for 5 genes in Hydrogenophaga sp. GW460-11-11-14-LB1

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500 ntGFF599 and GFF600 are separated by 7 nucleotidesGFF600 and GFF601 are separated by 4 nucleotidesGFF601 and GFF602 are separated by 91 nucleotidesGFF602 and GFF603 overlap by 4 nucleotides GFF599 - Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1), at 273,491 to 274,861 GFF599 GFF600 - Phosphohydrolase (MutT/nudix family protein), at 274,869 to 275,486 GFF600 GFF601 - Transcriptional regulator, IclR family, at 275,491 to 276,252 GFF601 GFF602 - Oxidoreductase, short-chain dehydrogenase/reductase family (EC 1.1.1.-), at 276,344 to 277,159 GFF602 GFF603 - Monooxygenase, flavin-binding family, at 277,156 to 278,469 GFF603
Group Condition GFF599 GFF600 GFF601 GFF602 GFF603
carbon source Ying_sugar7 rep C; time point 1 N.D. -0.3 +0.1 -0.6 -0.2
carbon source Ying_Others16 rep B; time point 2 N.D. -0.4 -0.2 -0.2 -0.1
carbon source Ying_OrganicAcid7 rep C; time point 1 N.D. -0.1 -0.2 -0.5 -0.0
carbon source Ying_all64 rep B; time point 1 N.D. -0.5 +0.2 -0.4 -0.0
carbon source Ying_all64 rep B; time point 3 N.D. -0.4 +0.1 -0.4 -0.0
carbon source Ying_Nucleobase14 rep B; time point 2 N.D. +0.3 +0.1 -0.6 +0.2
carbon source Ying_AminoAcid20 rep B; time point 1 N.D. +0.6 -0.2 -0.3 +0.1
carbon source Ying_all64 rep B; time point 2 N.D. +0.6 -0.1 -0.3 +0.0
carbon source Ying_all64 rep C; time point 3 N.D. +0.3 +0.3 -0.2 -0.1
carbon source Ying_sugar7 rep C; time point 2 N.D. +0.9 -0.4 -0.2 -0.0
carbon source Ying_Others16 rep A; time point 1 N.D. +0.7 -0.0 -0.5 +0.2
carbon source Ying_sugar7 rep A; time point 2 N.D. +0.6 +0.0 -0.3 +0.0
carbon source Ying_OrganicAcid7 rep B; time point 1 N.D. +0.6 -0.2 +0.0 +0.0
carbon source Ying_all64 rep A; time point 1 N.D. +0.5 +0.0 -0.3 +0.2
carbon source Ying_Nucleobase14 rep B; time point 1 N.D. +0.7 +0.1 -0.1 -0.2
carbon source Ying_all64 rep A; time point 2 N.D. +0.9 -0.2 -0.2 +0.0
carbon source Ying_AminoAcid20 rep C; time point 2 N.D. +0.5 +0.3 -0.2 -0.1
carbon source Ying_Others16 rep C; time point 3 N.D. +0.5 -0.2 +0.2 -0.0
carbon source Ying_AminoAcid20 rep B; time point 2 N.D. +0.7 -0.1 +0.1 -0.1
carbon source Ying_Nucleobase14 rep A; time point 2 N.D. +0.9 +0.4 -0.5 -0.2
carbon source Ying_Nucleobase14 rep C; time point 1 N.D. +0.8 +0.0 -0.2 +0.0
carbon source Ying_Nucleobase14 rep C; time point 2 N.D. +1.0 -0.1 -0.1 -0.1
carbon source Ying_AminoAcid20 rep A; time point 1 N.D. +0.8 -0.1 -0.1 +0.1
carbon source Ying_Others16 rep B; time point 1 N.D. +0.9 -0.1 -0.0 +0.0
carbon source Ying_OrganicAcid7 rep C; time point 2 N.D. +0.6 +0.2 +0.1 -0.1
carbon source Ying_OrganicAcid7 rep B; time point 2 N.D. +0.7 +0.2 -0.0 +0.0
carbon source Ying_OrganicAcid7 rep A; time point 2 N.D. +1.0 +0.0 -0.0 -0.0
carbon source Ying_all64 rep A; time point 3 N.D. +0.7 +0.3 +0.1 +0.1
carbon source Ying_OrganicAcid7 rep A; time point 3 N.D. +1.4 +0.4 -0.5 +0.3
carbon source Ying_OrganicAcid7 rep C; time point 3 N.D. +1.3 +0.4 +0.1 -0.0
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