Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF598 and GFF599 are separated by 46 nucleotidesGFF599 and GFF600 are separated by 60 nucleotidesGFF600 and GFF601 are separated by 22 nucleotidesGFF601 and GFF602 are separated by 108 nucleotides GFF598 - no description, at 644,831 to 645,157 GFF598 GFF599 - no description, at 645,204 to 645,434 GFF599 GFF600 - Metal-dependent phosphohydrolase, HD subdomain, at 645,495 to 646,085 GFF600 GFF601 - Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases, at 646,108 to 646,875 GFF601 GFF602 - Transcriptional regulator, LysR family => TcuR, at 646,984 to 647,910 GFF602
Group Condition GFF598 GFF599 GFF600 GFF601 GFF602
complex community Community=Locust bean gum; Passage=4 -3.4 N.D. +0.1 +0.1 -1.0
complex community Community=guar; Passage=4 -3.5 N.D. +0.0 +0.1 -0.2
complex community Community=guar; Passage=4 -1.9 N.D. -0.1 -0.1 -0.7
complex community Community=Locust bean gum; Passage=4 +0.0 N.D. +0.3 -0.7 -1.9
complex community Community=Locust bean gum; Passage=4 +0.3 N.D. -0.0 +0.0 -2.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -1.8 N.D. -0.1 +0.1 -0.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.9 N.D. -0.2 -0.0 -0.8
phage phage_bap4 -0.1 N.D. -0.0 +0.1 -1.6
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.3 N.D. +0.0 -0.1 -1.2
complex community Community=arabino-guar; Passage=4 -1.2 N.D. +0.2 -0.3 -0.2
complex community Community=guar; Passage=4 +0.6 N.D. -0.4 -0.1 -1.5
vitamin M9 with calcium pantothenate 10 mg/mL +1.1 N.D. +0.0 -0.2 -2.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.5 N.D. -0.0 +0.1 -0.7
phage phage_bap4 -1.5 N.D. +0.0 +0.2 +0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.4 N.D. -0.2 +0.1 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -1.0 N.D. -0.0 -0.0 +0.8
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.5 N.D. -0.2 +0.0 -0.5
complex community Community=Locust bean gum; Passage=4 +0.5 N.D. +0.2 -0.5 -0.3
phage phage_bap4 -0.6 N.D. +0.2 +0.3 +0.1
complex community Community=arabino-guar; Passage=4 +2.1 N.D. -0.5 -0.5 -1.0
vitamin M9 with Supernatant from Cyptococcus +0.7 N.D. -0.0 -0.0 -0.5
complex community Community=arabino-guar; Passage=4 +1.1 N.D. -0.2 -0.2 -0.5
vitamin M9 with Supernatant from Cyptococcus +0.7 N.D. -0.2 +0.2 -0.3
phage phage_bap4 +0.3 N.D. +0.1 +0.4 -0.4
phage phage_bap4 +1.1 N.D. +0.1 +0.1 -0.6
vitamin M9 with Supernatant from Cyptococcus +0.2 N.D. -0.2 -0.1 +0.9
vitamin M9 with calcium pantothenate 10 mg/mL +0.4 N.D. +0.1 -0.2 +0.7
complex community Community=guar; Passage=4 +0.8 N.D. +0.1 -0.4 +1.0
complex community Community=Kojac gum; Passage=4 +1.2 N.D. +0.1 -0.1 +0.8
complex community Community=arabino-guar; Passage=4 +1.3 N.D. +0.1 +0.1 +0.6
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