Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF5995 and GFF5996 overlap by 4 nucleotidesGFF5996 and GFF5997 are separated by 19 nucleotidesGFF5997 and GFF5998 are separated by 103 nucleotidesGFF5998 and GFF5999 are separated by 106 nucleotides GFF5995 - LysR family transcriptional regulator STM3121, at 54,148 to 55,083 GFF5995 GFF5996 - BUG/TctC family periplasmic protein, at 55,080 to 56,075 GFF5996 GFF5997 - hypothetical protein, at 56,095 to 56,664 GFF5997 GFF5998 - Uncharacterized protein YiiX, at 56,768 to 57,394 GFF5998 GFF5999 - DNA polymerase IV (EC 2.7.7.7), at 57,501 to 58,688 GFF5999
Group Condition GFF5995 GFF5996 GFF5997 GFF5998 GFF5999
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.7 -0.3 +0.2 -0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus -0.2 -0.4 -0.1 -0.2 -0.1
complex community Community=arabino-guar; Passage=4 -0.4 -0.0 +0.0 -0.9 +0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 -0.5 -0.2 +0.2 +0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.5 -0.1 +0.1 -0.2 +0.0
complex community Community=guar; Passage=4 +0.2 -0.3 -0.6 +0.1 -0.1
phage phage_bap4 -0.4 +0.1 -0.1 -0.2 +0.1
complex community Community=Locust bean gum; Passage=4 -0.2 -0.1 +0.2 -0.8 +0.5
complex community Community=guar; Passage=4 -0.3 -0.5 +0.3 +0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 -0.4 -0.3 +0.2 +0.0
phage phage_bap4 -0.4 +0.2 -0.1 -0.1 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL +0.2 -0.1 -0.5 +0.2 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.5 -0.0 +0.2 +0.2 -0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.2 -0.2 +0.2 -0.3 -0.1
complex community Community=arabino-guar; Passage=4 +0.7 -1.1 +0.4 +0.1 -0.1
complex community Community=Locust bean gum; Passage=4 +0.5 +0.3 +0.1 -0.6 -0.2
no phage control no phage control +0.2 +0.3 -0.4 -0.1 +0.1
phage phage_bap4 -0.1 -0.2 -0.1 +0.2 +0.4
no phage control no phage control +0.5 +0.1 -0.0 -0.3 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.3 -0.2 +0.2 -0.1 +0.1
complex community Community=arabino-guar; Passage=4 +0.3 +0.2 -0.2 -0.4 +0.5
vitamin M9 with Supernatant from Cyptococcus +0.0 -0.1 +0.3 +0.3 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL -0.3 -0.1 +0.3 +0.4 +0.1
complex community Community=guar; Passage=4 +0.2 +0.3 -0.5 -0.0 +0.6
no phage control no phage control -0.2 +0.2 +0.2 +0.4 +0.0
complex community Community=guar; Passage=4 +1.0 -0.3 +0.4 -0.1 -0.3
complex community Community=arabino-guar; Passage=4 +0.7 -0.4 +0.0 +0.7 -0.0
complex community Community=Locust bean gum; Passage=4 +0.9 +0.3 +0.1 -0.9 +0.6
complex community Community=Kojac gum; Passage=4 -0.3 +0.4 +0.2 -0.0 +0.7
complex community Community=Locust bean gum; Passage=4 +0.9 +0.4 +0.6 +1.3 -0.1
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