Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

Or view all 554 experiments or choose conditions or try the comparative fitness browser

Group	Condition	PS417_03025	PS417_03030	PS417_03035	PS417_03040	PS417_03045
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.1	-0.3	-0.4	-0.1	-4.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.2	+0.4	+0.0	+0.1	-4.5
root	root sample 6; outgrowth in LB	-0.3	+0.1	-0.4	-0.5	-2.4
phage	P. simiae ORA MOI 0.1	-0.3	-0.1	-0.4	-0.1	-1.4
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.1	-0.3	+0.0	-0.3	-1.8
phage	JP1 MOI 1	-0.2	+0.7	+0.0	+0.4	-2.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.5	+0.3	+0.0	-0.5	-1.4
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.2	-0.1	-0.1	+0.1	-1.5
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.2	+0.4	+0.1	-0.4	-1.5
phage	JP1 MOI 10	+0.3	-0.6	-0.2	+0.1	-1.3
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.0	+0.0	-0.3	+0.2	-1.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.4	+0.2	-0.1	+0.4	-1.7
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	-0.0	-0.3	+0.2	-0.2	-1.3
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.1	-0.8	+0.3	-0.3	-0.6
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.3	-0.4	-0.1	+0.2	-1.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.1	+0.7	-0.5	-0.2	-0.6
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.1	-0.6	-0.4	-0.2	+0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.5	+0.3	-0.3	-0.1	-0.7
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.4	-0.4	-0.1	+0.6	-0.6
seeds	Growth on radish seeds for 72 hours	-0.4	-0.4	+0.1	-0.5	+1.2
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	+0.3	-0.5	-0.1	-0.2	+0.8
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.3	+1.0	-0.0	-0.1	-0.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.5	-0.6	-0.1	-0.0	+0.7
liquid stress	Scopoletin 0.5 mM; liquid stress	+0.3	-0.4	-0.1	-0.2	+1.0
seeds	Growth on radish seeds for 72 hours	+0.2	+0.4	-0.2	-0.5	+0.8
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.7	-0.3	+0.2	+0.6	-0.4
supernatant control	Vogels_fungal_media 0.1X	-0.2	+0.9	+0.1	-0.1	+0.7
soil	soil sample 7; outgrowth in LB	-0.2	+0.3	+0.2	-0.1	+1.5
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	+0.4	+0.4	-0.1	+0.3	+0.9
carbon source	2'-Deoxyinosine 5 mM (C)	+0.4	+0.6	-0.1	+0.1	+0.9