Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF5958 and GFF5959 are separated by 2 nucleotidesGFF5959 and GFF5960 are separated by 56 nucleotidesGFF5960 and GFF5961 overlap by 4 nucleotidesGFF5961 and GFF5962 are separated by 35 nucleotides GFF5958 - FIG00537018: hypothetical protein, at 13,977 to 14,696 GFF5958 GFF5959 - Putative amidase R03093, at 14,699 to 16,048 GFF5959 GFF5960 - Acetyltransferases, including N-acetylases of ribosomal proteins, at 16,105 to 16,719 GFF5960 GFF5961 - Acetyltransferase, at 16,716 to 17,210 GFF5961 GFF5962 - hypothetical protein, at 17,246 to 17,524 GFF5962
Group Condition GFF5958 GFF5959 GFF5960 GFF5961 GFF5962
complex community Community=guar; Passage=4 -3.0 -0.3 -0.7 -0.5 N.D.
complex community Community=guar; Passage=4 -1.5 +0.7 -0.6 -1.4 N.D.
complex community Community=Kojac gum; Passage=4 -0.9 -2.2 -0.0 +0.9 N.D.
complex community Community=guar; Passage=4 -1.9 +0.2 -0.2 -0.3 N.D.
complex community Community=Locust bean gum; Passage=4 -0.8 -0.4 -0.8 -0.1 N.D.
phage phage_bap4 -0.3 -0.5 -0.4 -0.2 N.D.
complex community Community=Locust bean gum; Passage=4 -0.3 -0.0 +0.3 -1.3 N.D.
vitamin M9 with Supernatant from Cyptococcus -0.7 -0.8 +0.0 +0.2 N.D.
phage phage_bap4 -0.9 -0.3 -0.1 +0.2 N.D.
complex community Community=arabino-guar; Passage=4 -0.1 -0.2 -0.4 -0.5 N.D.
vitamin M9 with Supernatant from Cyptococcus -0.8 -0.3 -0.3 +0.2 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.6 -0.4 +0.3 -0.2 N.D.
no phage control no phage control -0.5 -0.5 -0.2 +0.3 N.D.
phage phage_bap4 -0.8 +0.1 -0.2 +0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL -0.7 -0.3 -0.2 +0.4 N.D.
phage phage_bap4 -0.6 -0.2 +0.3 +0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 -0.1 -0.4 +0.4 N.D.
no phage control no phage control -0.7 -0.1 +0.3 +0.3 N.D.
complex community Community=Locust bean gum; Passage=4 +1.3 +0.2 -0.4 -1.3 N.D.
complex community Community=Locust bean gum; Passage=4 +0.6 +0.1 -0.5 -0.3 N.D.
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.3 -0.5 +0.2 +0.4 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 -0.7 +0.1 +0.4 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 -0.3 -0.4 +0.5 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.3 -0.7 +0.3 +0.0 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.7 -0.5 -0.2 +0.3 N.D.
complex community Community=guar; Passage=4 +0.3 -0.5 +0.5 +0.2 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL +0.5 -0.5 +0.5 +0.1 N.D.
complex community Community=arabino-guar; Passage=4 -0.0 -0.4 +0.3 +0.7 N.D.
vitamin M9 with Supernatant from Cyptococcus +0.8 -0.2 -0.0 +0.3 N.D.
complex community Community=arabino-guar; Passage=4 +1.2 +0.6 +0.4 -0.2 N.D.
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