Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF5957 and GFF5958 are separated by 7 nucleotidesGFF5958 and GFF5959 are separated by 2 nucleotidesGFF5959 and GFF5960 are separated by 56 nucleotidesGFF5960 and GFF5961 overlap by 4 nucleotides GFF5957 - Uncharacterized MFS-type transporter, at 12,644 to 13,969 GFF5957 GFF5958 - FIG00537018: hypothetical protein, at 13,977 to 14,696 GFF5958 GFF5959 - Putative amidase R03093, at 14,699 to 16,048 GFF5959 GFF5960 - Acetyltransferases, including N-acetylases of ribosomal proteins, at 16,105 to 16,719 GFF5960 GFF5961 - Acetyltransferase, at 16,716 to 17,210 GFF5961
Group Condition GFF5957 GFF5958 GFF5959 GFF5960 GFF5961
complex community Community=guar; Passage=4 +0.4 -3.0 -0.3 -0.7 -0.5
complex community Community=Kojac gum; Passage=4 -0.5 -0.9 -2.2 -0.0 +0.9
complex community Community=guar; Passage=4 +0.4 -1.5 +0.7 -0.6 -1.4
complex community Community=guar; Passage=4 +0.7 -1.9 +0.2 -0.2 -0.3
phage phage_bap4 -0.0 -0.3 -0.5 -0.4 -0.2
complex community Community=Locust bean gum; Passage=4 +0.9 -0.8 -0.4 -0.8 -0.1
phage phage_bap4 +0.1 -0.9 -0.3 -0.1 +0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 -0.6 -0.4 +0.3 -0.2
complex community Community=arabino-guar; Passage=4 +0.2 -0.1 -0.2 -0.4 -0.5
vitamin M9 with Supernatant from Cyptococcus +0.2 -0.8 -0.3 -0.3 +0.2
vitamin M9 with Supernatant from Cyptococcus +0.3 -0.7 -0.8 +0.0 +0.2
no phage control no phage control -0.0 -0.5 -0.5 -0.2 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 -0.7 -0.3 -0.2 +0.4
no phage control no phage control +0.1 -0.7 -0.1 +0.3 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 +0.3 -0.7 +0.3 +0.0
complex community Community=arabino-guar; Passage=4 +0.2 +0.0 -0.1 -0.6 +0.4
complex community Community=Locust bean gum; Passage=4 +1.2 -0.3 -0.0 +0.3 -1.3
phage phage_bap4 +0.4 -0.6 -0.2 +0.3 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 +0.1 -0.3 -0.4 +0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.2 +0.1 -0.7 +0.1 +0.4
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.3 -0.3 -0.5 +0.2 +0.4
complex community Community=arabino-guar; Passage=4 -0.4 -0.0 -0.4 +0.3 +0.7
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.0 +0.7 -0.5 -0.2 +0.3
phage phage_bap4 +0.2 -0.2 -0.3 +0.4 +0.3
complex community Community=Locust bean gum; Passage=4 +0.9 +1.3 +0.2 -0.4 -1.3
vitamin M9 with calcium pantothenate 10 mg/mL +0.3 +0.5 -0.5 +0.5 +0.1
vitamin M9 with Supernatant from Cyptococcus +0.1 +0.8 -0.2 -0.0 +0.3
complex community Community=guar; Passage=4 +0.6 +0.3 -0.5 +0.5 +0.2
complex community Community=Locust bean gum; Passage=4 +1.2 +0.6 +0.1 -0.5 -0.3
complex community Community=arabino-guar; Passage=4 -0.1 +1.2 +0.6 +0.4 -0.2
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