Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF593 and GFF594 are separated by 143 nucleotidesGFF594 and GFF595 are separated by 18 nucleotidesGFF595 and GFF596 are separated by 72 nucleotidesGFF596 and GFF597 are separated by 3 nucleotides GFF593 - tRNA (guanine(46)-N(7))-methyltransferase (EC 2.1.1.33), at 639,631 to 640,389 GFF593 GFF594 - ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate), at 640,533 to 641,654 GFF594 GFF595 - Transcriptional regulator, LysR family, at 641,673 to 642,551 GFF595 GFF596 - no description, at 642,624 to 643,160 GFF596 GFF597 - Uncharacterized MFS-type transporter, at 643,164 to 644,714 GFF597
Group Condition GFF593 GFF594 GFF595 GFF596 GFF597
no phage control no phage control -0.2 +0.0 -0.1 -0.4 -0.2
complex community Community=Locust bean gum; Passage=4 +0.0 +0.4 -0.4 -0.6 +0.1
complex community Community=Kojac gum; Passage=4 -0.3 +0.1 -0.1 -0.3 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 -0.5 +0.1 +0.3 +0.0
complex community Community=guar; Passage=4 +0.2 +0.2 -0.4 -0.2 +0.1
phage phage_bap4 -0.2 -0.0 +0.2 +0.1 -0.0
complex community Community=Locust bean gum; Passage=4 -0.4 -0.0 +0.0 +0.0 +0.4
complex community Community=Locust bean gum; Passage=4 -0.4 +0.5 -0.2 +0.1 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.2 -0.2 -0.1 +0.2 -0.0
complex community Community=arabino-guar; Passage=4 -0.3 +0.4 -0.2 +0.2 +0.1
complex community Community=guar; Passage=4 -0.0 -0.4 +0.3 +0.2 +0.2
phage phage_bap4 -0.1 +0.1 +0.2 -0.1 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 +0.2 -0.0 +0.4 -0.1
phage phage_bap4 -0.2 +0.1 +0.3 +0.3 +0.1
complex community Community=Locust bean gum; Passage=4 +0.5 +0.2 -0.1 -0.1 +0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.0 +0.3 +0.2 +0.2 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.0 +0.2 -0.0 +0.3 +0.1
phage phage_bap4 +0.0 +0.2 +0.3 +0.1 -0.0
vitamin M9 with Supernatant from Cyptococcus -0.1 +0.1 +0.1 +0.5 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.4 +0.2 -0.1 +0.1 +0.0
complex community Community=arabino-guar; Passage=4 +0.1 -0.0 +0.2 +0.4 -0.0
complex community Community=arabino-guar; Passage=4 -0.0 +0.1 +0.3 +0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 +0.2 +0.0 +0.3 -0.0
complex community Community=Kojac gum; Passage=1 -0.1 +0.2 +0.0 +0.5 +0.1
vitamin M9 with Supernatant from Cyptococcus -0.0 +0.1 +0.1 +0.5 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 -0.1 -0.1 +0.6 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.2 +0.2 +0.1 +0.4 +0.0
complex community Community=guar; Passage=4 +0.2 +0.3 +0.1 +0.4 -0.0
complex community Community=arabino-guar; Passage=4 +0.2 +0.2 -0.1 +0.5 +0.1
vitamin M9 with Supernatant from Cyptococcus +0.1 +0.3 +0.1 +0.3 +0.1
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