Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF5933 and GFF5934 are separated by 2 nucleotidesGFF5934 and GFF5935 are separated by 8 nucleotidesGFF5935 and GFF5936 are separated by 25 nucleotidesGFF5936 and GFF5937 are separated by 39 nucleotides GFF5933 - Pentapeptide repeat family protein, at 148,325 to 149,380 GFF5933 GFF5934 - hypothetical protein, at 149,383 to 152,019 GFF5934 GFF5935 - VgrG protein, at 152,028 to 154,403 GFF5935 GFF5936 - T6SS AAA+ chaperone ClpV (TssH), at 154,429 to 157,158 GFF5936 GFF5937 - T6SS component TssG (ImpH/VasB), at 157,198 to 158,223 GFF5937
Group Condition GFF5933 GFF5934 GFF5935 GFF5936 GFF5937
complex community Community=guar; Passage=4 N.D. -0.2 -0.2 -0.5 -1.5
complex community Community=guar; Passage=4 N.D. -0.9 -0.1 +0.2 -1.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.4 -0.1 -0.4 -0.8
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.1 -0.2 -0.5 -0.4
phage phage_bap4 N.D. -0.7 +0.0 -0.4 -0.1
no phage control no phage control N.D. -0.4 +0.1 -0.5 -0.5
complex community Community=guar; Passage=4 N.D. -0.7 +0.6 -0.9 -0.2
phage phage_bap4 N.D. -0.4 +0.2 -0.3 -0.6
complex community Community=guar; Passage=4 N.D. -0.2 -0.5 -0.0 -0.4
complex community Community=Locust bean gum; Passage=1 N.D. -0.1 -0.3 -0.1 -0.6
no phage control no phage control N.D. -0.1 +0.0 -0.2 -0.8
complex community Community=Locust bean gum; Passage=4 N.D. -1.0 +0.1 -0.4 +0.3
no phage control no phage control N.D. -0.4 -0.3 -0.3 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. -0.4 +0.0 -0.2 -0.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. -0.2 -0.1 -0.0 -0.6
phage phage_bap4 N.D. -0.5 +0.2 -0.4 -0.1
vitamin M9 with Supernatant from Cyptococcus N.D. +0.1 -0.1 -0.5 -0.3
phage phage_bap4 N.D. -0.1 +0.1 -0.4 -0.3
complex community Community=Locust bean gum; Passage=4 N.D. -0.8 +0.9 -0.6 -0.1
complex community Community=Locust bean gum; Passage=4 N.D. -0.7 -0.3 -0.3 +0.7
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. -0.3 +0.1 +0.1 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL N.D. -0.0 +0.2 -0.2 -0.4
phage phage_bap4 N.D. +0.2 +0.3 -0.4 -0.3
complex community Community=arabino-guar; Passage=4 N.D. +0.2 -0.7 -0.4 +0.8
vitamin M9 with calcium pantothenate 10 mg/mL N.D. +0.3 +0.1 -0.3 +0.3
complex community Community=Locust bean gum; Passage=4 N.D. -0.3 +0.6 +0.1 +0.1
complex community Community=arabino-guar; Passage=4 N.D. +0.6 +0.3 +0.1 -0.2
complex community Community=arabino-guar; Passage=4 N.D. +0.1 -0.0 +0.9 -0.1
complex community Community=Kojac gum; Passage=4 N.D. +0.5 +0.5 -0.1 +0.1
complex community Community=arabino-guar; Passage=4 N.D. -0.1 -0.2 +0.7 +1.0
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