Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF5910 and GFF5911 are separated by 37 nucleotidesGFF5911 and GFF5912 are separated by 11 nucleotidesGFF5912 and GFF5913 are separated by 240 nucleotidesGFF5913 and GFF5914 overlap by 4 nucleotides GFF5910 - NAD/NADP transhydrogenase alpha subunit, at 125,695 to 125,979 GFF5910 GFF5911 - Probable L-amino-acid oxidase (EC 1.4.3.2), at 126,017 to 127,324 GFF5911 GFF5912 - Two-component transcriptional response regulator, LuxR family, but with unusual receiver domain, at 127,336 to 128,013 GFF5912 GFF5913 - T6SS outer membrane component TssL (ImpK/VasF) / unknown domain, at 128,254 to 129,597 GFF5913 GFF5914 - hypothetical protein, at 129,594 to 130,706 GFF5914
Group Condition GFF5910 GFF5911 GFF5912 GFF5913 GFF5914
complex community Community=Locust bean gum; Passage=4 N.D. -0.5 -2.4 -0.2 +0.8
complex community Community=Locust bean gum; Passage=4 N.D. -0.1 -0.8 -0.1 -1.0
complex community Community=arabino-guar; Passage=4 N.D. +0.4 -0.3 -0.7 -1.4
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. -0.1 -0.4 -0.3 -1.2
complex community Community=Locust bean gum; Passage=4 N.D. +0.2 -0.2 -0.6 -1.1
complex community Community=arabino-guar; Passage=4 N.D. +0.1 -1.6 -0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. +0.1 -0.2 +0.1 -1.0
phage phage_bap4 N.D. +0.2 +0.4 -0.3 -1.3
phage phage_bap4 N.D. -0.0 +0.1 -0.2 -0.9
complex community Community=guar; Passage=4 N.D. +0.2 -0.7 -0.8 +0.4
phage phage_bap4 N.D. +0.0 +0.2 -0.4 -0.6
phage phage_bap4 N.D. +0.1 +0.2 -0.1 -0.8
complex community Community=Locust bean gum; Passage=4 N.D. +0.3 -0.1 +0.3 -0.6
no phage control no phage control N.D. +0.2 +0.2 +0.2 -0.7
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. +0.4 -0.3 -0.4 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL N.D. +0.2 -0.1 -0.6 +0.6
vitamin M9 with Supernatant from Cyptococcus N.D. +0.2 -0.6 -0.2 +0.7
complex community Community=guar; Passage=4 N.D. -0.3 -0.1 -0.4 +1.0
phage phage_bap4 N.D. +0.4 +0.4 -0.4 -0.1
no phage control no phage control N.D. +0.1 +0.3 +0.4 -0.4
complex community Community=Kojac gum; Passage=4 N.D. -0.2 +0.3 +0.4 -0.2
vitamin M9 with Supernatant from Cyptococcus N.D. +0.2 -0.1 -0.2 +0.6
complex community Community=arabino-guar; Passage=4 N.D. -0.4 +0.1 +0.1 +0.7
vitamin M9 with Supernatant from Cyptococcus N.D. +0.3 -0.2 -0.1 +0.8
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.1 -0.1 +0.3 +0.7
complex community Community=arabino-guar; Passage=4 N.D. -0.2 -0.3 +0.3 +1.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. +0.1 +0.3 +0.2 +0.6
complex community Community=guar; Passage=4 N.D. +0.6 +0.2 +0.0 +0.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. +0.1 +0.2 +0.2 +0.8
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. +0.3 +0.4 +0.4 +0.7
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