Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF5904 and GFF5905 are separated by 354 nucleotidesGFF5905 and GFF5906 are separated by 14 nucleotidesGFF5906 and GFF5907 overlap by 38 nucleotidesGFF5907 and GFF5908 are separated by 2 nucleotides GFF5904 - Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1), at 119,806 to 121,197 GFF5904 GFF5905 - FIG01150669: hypothetical protein, at 121,552 to 122,034 GFF5905 GFF5906 - Nitrilase (EC 3.5.5.7), at 122,049 to 123,092 GFF5906 GFF5907 - Biotin synthase-related enzyme, at 123,055 to 124,137 GFF5907 GFF5908 - Histone acetyltransferase HPA2 and related acetyltransferases, at 124,140 to 124,700 GFF5908
Group Condition GFF5904 GFF5905 GFF5906 GFF5907 GFF5908
complex community Community=Kojac gum; Passage=4 -0.2 +0.3 -0.7 -1.2 N.D.
complex community Community=Locust bean gum; Passage=4 -0.0 +0.0 +0.6 -2.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.0 -0.2 +0.1 -0.8 N.D.
phage phage_bap4 -0.3 -0.4 +0.1 -0.2 N.D.
complex community Community=Locust bean gum; Passage=4 -0.2 +0.0 +0.2 -0.9 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 -0.2 +0.0 -0.5 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.0 +0.1 +0.2 -1.0 N.D.
complex community Community=Locust bean gum; Passage=4 -0.1 -0.2 -0.1 -0.4 N.D.
complex community Community=guar; Passage=4 +0.1 +0.1 +0.0 -0.8 N.D.
complex community Community=Locust bean gum; Passage=4 -0.1 -0.6 -0.5 +0.6 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 -0.0 +0.1 -0.5 N.D.
phage phage_bap4 -0.0 -0.0 +0.2 -0.6 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.2 -0.1 +0.2 -0.7 N.D.
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.1 -0.1 +0.2 -0.6 N.D.
vitamin M9 with Supernatant from Cyptococcus -0.0 -0.4 +0.2 -0.0 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.0 +0.1 +0.4 -0.8 N.D.
complex community Community=arabino-guar; Passage=4 -0.0 +0.1 +0.5 -0.8 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.1 +0.0 +0.4 -0.5 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 -0.1 +0.2 -0.4 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 -0.1 +0.3 -0.3 N.D.
complex community Community=arabino-guar; Passage=4 -0.2 +0.4 -0.1 -0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 -0.1 +0.3 -0.1 N.D.
complex community Community=guar; Passage=4 -0.2 +0.5 +0.0 -0.3 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 -0.3 +0.2 +0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 +0.2 +0.3 -0.3 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 -0.1 +0.3 +0.3 N.D.
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.2 +0.3 -0.2 +0.2 N.D.
complex community Community=arabino-guar; Passage=4 -0.0 +0.0 +1.0 -0.3 N.D.
complex community Community=arabino-guar; Passage=4 +0.2 -0.3 +0.2 +0.7 N.D.
complex community Community=guar; Passage=4 -0.1 +0.2 +0.5 +1.1 N.D.
remove
GFF5904
plot		 remove
GFF5905
plot		 remove
GFF5906		 remove
GFF5907
plot		 remove
GFF5908
plot