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Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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500 nt
GFF5893 and GFF5894 are separated by 5 nucleotides
GFF5894 and GFF5895 overlap by 4 nucleotides
GFF5895 and GFF5896 are separated by 2 nucleotides
GFF5896 and GFF5897 are separated by 33 nucleotides
GFF5893 - Low-specificity L-threonine aldolase (EC 4.1.2.48), at 112,129 to 113,187
GFF5893
GFF5894 - Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85), at 113,193 to 113,777
GFF5894
GFF5895 - hypothetical protein, at 113,774 to 114,166
GFF5895
GFF5896 - Anthranilate synthase, aminase component (EC 4.1.3.27), at 114,169 to 115,671
GFF5896
GFF5897 - hypothetical protein, at 115,705 to 115,857
GFF5897
Group
Condition
GFF5893
GFF5894
GFF5895
GFF5896
GFF5897
complex community
Community=Locust bean gum; Passage=4
-1.0
N.D.
-2.1
-2.0
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.2
N.D.
-0.3
-4.1
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.2
N.D.
-0.0
-4.3
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.6
N.D.
+0.3
-3.8
+0.0
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
+0.2
N.D.
-1.1
-3.1
-0.1
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.7
N.D.
+0.1
-3.3
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.2
N.D.
-0.2
-3.6
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.1
N.D.
+0.0
-3.8
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.1
N.D.
-0.4
-3.6
+0.1
complex community
Community=Locust bean gum; Passage=4
-0.8
N.D.
-0.5
-2.2
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.1
N.D.
+0.1
-3.8
+0.0
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.3
N.D.
+0.1
-3.5
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.4
N.D.
+0.4
-4.3
+0.0
complex community
Community=arabino-guar; Passage=4
-0.9
N.D.
-0.2
-2.4
-0.0
vitamin
M9 with Supernatant from Cyptococcus
+0.0
N.D.
+0.0
-3.4
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.2
N.D.
+0.1
-3.4
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.2
N.D.
-0.2
-3.2
+0.2
vitamin
M9 with Supernatant from Cyptococcus
-0.0
N.D.
-0.1
-3.4
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.1
N.D.
+0.2
-3.4
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.4
N.D.
-0.2
-3.5
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.1
N.D.
+0.1
-3.6
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.0
N.D.
-0.2
-3.2
+0.2
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.1
N.D.
+0.4
-3.6
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.1
N.D.
+0.1
-3.6
+0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.3
N.D.
-0.1
-3.3
-0.0
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
+0.2
N.D.
-0.3
-2.8
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.2
N.D.
+0.1
-3.2
+0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.3
N.D.
+0.3
-3.7
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.3
N.D.
+0.3
-3.0
+0.1
vitamin
M9 with Supernatant from Cyptococcus
+0.0
N.D.
+0.3
-3.3
+0.1
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