Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF5887 and GFF5888 are separated by 198 nucleotidesGFF5888 and GFF5889 are separated by 534 nucleotidesGFF5889 and GFF5890 overlap by 4 nucleotidesGFF5890 and GFF5891 are separated by 31 nucleotides GFF5887 - Protein translocase subunit SecE, at 106,562 to 106,945 GFF5887 GFF5888 - Translation elongation factor Tu, at 107,144 to 108,337 GFF5888 GFF5889 - Uracil-DNA glycosylase, family 1 (EC 3.2.2.27), at 108,872 to 109,579 GFF5889 GFF5890 - Indole-3-glycerol phosphate synthase (EC 4.1.1.48), at 109,576 to 110,376 GFF5890 GFF5891 - Anthranilate phosphoribosyltransferase (EC 2.4.2.18), at 110,408 to 111,430 GFF5891
Group Condition GFF5887 GFF5888 GFF5889 GFF5890 GFF5891
complex community Community=arabino-guar; Passage=4 N.D. N.D. -0.7 N.D. N.D.
complex community Community=arabino-guar; Passage=4 N.D. N.D. -0.5 N.D. N.D.
complex community Community=guar; Passage=4 N.D. N.D. -0.5 N.D. N.D.
complex community Community=Kojac gum; Passage=4 N.D. N.D. -0.4 N.D. N.D.
complex community Community=guar; Passage=4 N.D. N.D. -0.4 N.D. N.D.
complex community Community=Locust bean gum; Passage=4 N.D. N.D. -0.3 N.D. N.D.
complex community Community=Locust bean gum; Passage=4 N.D. N.D. -0.3 N.D. N.D.
no phage control no phage control N.D. N.D. -0.3 N.D. N.D.
complex community Community=guar; Passage=4 N.D. N.D. -0.2 N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus N.D. N.D. -0.2 N.D. N.D.
complex community Community=arabino-guar; Passage=4 N.D. N.D. -0.2 N.D. N.D.
phage phage_bap4 N.D. N.D. -0.2 N.D. N.D.
phage phage_bap4 N.D. N.D. -0.2 N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. N.D. -0.2 N.D. N.D.
no phage control no phage control N.D. N.D. -0.2 N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus N.D. N.D. -0.2 N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL N.D. N.D. -0.2 N.D. N.D.
no phage control no phage control N.D. N.D. -0.2 N.D. N.D.
phage phage_bap4 N.D. N.D. -0.1 N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. N.D. -0.1 N.D. N.D.
complex community Community=arabino-guar; Passage=4 N.D. N.D. -0.1 N.D. N.D.
phage phage_bap4 N.D. N.D. -0.1 N.D. N.D.
complex community Community=guar; Passage=4 N.D. N.D. -0.1 N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus N.D. N.D. -0.1 N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. N.D. +0.1 N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. N.D. +0.1 N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. N.D. +0.1 N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. N.D. +0.1 N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL N.D. N.D. +0.2 N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. N.D. +0.2 N.D. N.D.
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