Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF5875 and GFF5876 are separated by 89 nucleotidesGFF5876 and GFF5877 are separated by 56 nucleotidesGFF5877 and GFF5878 are separated by 28 nucleotidesGFF5878 and GFF5879 are separated by 146 nucleotides GFF5875 - Probable nitrogen assimilation regulatory protein NtrX, at 88,960 to 89,661 GFF5875 GFF5876 - Nitrogen regulation protein NtrY (EC 2.7.3.-), at 89,751 to 92,021 GFF5876 GFF5877 - Probable proline rich signal peptide protein, at 92,078 to 92,671 GFF5877 GFF5878 - 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176), at 92,700 to 94,001 GFF5878 GFF5879 - LemA, at 94,148 to 94,738 GFF5879
Group Condition GFF5875 GFF5876 GFF5877 GFF5878 GFF5879
complex community Community=arabino-guar; Passage=4 N.D. -2.4 -2.0 -0.4 -1.1
complex community Community=Locust bean gum; Passage=4 N.D. -2.3 -2.0 -0.4 -0.7
complex community Community=guar; Passage=4 N.D. -2.2 -2.2 -0.3 -0.4
complex community Community=Locust bean gum; Passage=4 N.D. -2.0 -2.0 -0.4 -0.6
complex community Community=arabino-guar; Passage=4 N.D. -2.6 -2.3 -0.0 -0.0
complex community Community=guar; Passage=4 N.D. -2.4 -2.2 -0.2 +0.0
no phage control no phage control N.D. -1.7 -2.6 -0.0 -0.2
complex community Community=Kojac gum; Passage=4 N.D. -1.8 -1.9 -0.1 -0.8
complex community Community=arabino-guar; Passage=4 N.D. -2.3 -2.0 +0.4 -0.7
complex community Community=guar; Passage=4 N.D. -2.2 -1.9 +0.2 -0.4
phage phage_bap4 N.D. -1.6 -2.7 -0.0 +0.0
phage phage_bap4 N.D. -1.7 -2.2 -0.1 -0.2
complex community Community=Locust bean gum; Passage=4 N.D. -2.2 -1.9 +0.2 -0.3
complex community Community=guar; Passage=4 N.D. -2.0 -1.9 +0.2 -0.4
phage phage_bap4 N.D. -1.6 -1.9 -0.1 -0.1
no phage control no phage control N.D. -1.8 -1.9 -0.0 -0.0
complex community Community=Locust bean gum; Passage=4 N.D. -2.0 -1.7 +0.2 -0.3
phage phage_bap4 N.D. -1.4 -2.0 -0.1 -0.3
complex community Community=arabino-guar; Passage=4 N.D. -1.3 -2.0 -0.0 -0.2
phage phage_bap4 N.D. -1.3 -1.7 -0.1 -0.3
no phage control no phage control N.D. -1.8 -1.4 -0.0 -0.2
phage phage_bap4 N.D. -1.3 -1.7 -0.1 -0.1
no phage control no phage control N.D. -1.3 -1.8 -0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. -1.1 -2.1 +0.0 +0.1
phage phage_bap4 N.D. -1.5 -1.4 -0.3 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL N.D. -1.2 -1.5 -0.2 +0.2
phage phage_bap4 N.D. -1.1 -1.4 -0.1 -0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. -0.9 -1.6 -0.0 +0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. -0.9 -1.5 -0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus N.D. -0.9 -1.5 +0.2 -0.1
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