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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF5871 and GFF5872 are separated by 449 nucleotides
GFF5872 and GFF5873 are separated by 19 nucleotides
GFF5873 and GFF5874 are separated by 128 nucleotides
GFF5874 and GFF5875 are separated by 203 nucleotides
GFF5871 - hypothetical protein, at 83,745 to 86,036
GFF5871
GFF5872 - Inner membrane protein YbhQ, at 86,486 to 87,520
GFF5872
GFF5873 - no description, at 87,540 to 87,725
GFF5873
GFF5874 - hypothetical protein, at 87,854 to 88,756
GFF5874
GFF5875 - Probable nitrogen assimilation regulatory protein NtrX, at 88,960 to 89,661
GFF5875
Group
Condition
GFF5871
GFF5872
GFF5873
GFF5874
GFF5875
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.5
-0.1
N.D.
-0.1
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.6
-0.1
N.D.
-0.1
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.5
-0.1
N.D.
-0.0
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.6
-0.0
N.D.
-0.0
N.D.
complex community
Community=arabino-guar; Passage=4
-0.4
-0.2
N.D.
+0.0
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.5
+0.0
N.D.
-0.0
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.5
+0.0
N.D.
-0.0
N.D.
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.3
-0.0
N.D.
-0.2
N.D.
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
-0.3
-0.1
N.D.
-0.1
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.4
-0.1
N.D.
+0.0
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.3
-0.1
N.D.
-0.0
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.4
+0.1
N.D.
-0.0
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.3
+0.1
N.D.
-0.1
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.4
-0.0
N.D.
+0.1
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.4
+0.1
N.D.
-0.0
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.3
+0.1
N.D.
-0.0
N.D.
complex community
Community=Locust bean gum; Passage=1
-0.4
+0.2
N.D.
+0.0
N.D.
complex community
Community=arabino-guar; Passage=4
-0.2
+0.2
N.D.
+0.0
N.D.
complex community
Community=arabino-guar; Passage=4
-0.1
+0.5
N.D.
-0.1
N.D.
phage
phage_bap4
+0.3
+0.1
N.D.
-0.1
N.D.
complex community
Community=Locust bean gum; Passage=4
+0.5
-0.1
N.D.
+0.1
N.D.
complex community
Community=Locust bean gum; Passage=4
+0.5
-0.0
N.D.
+0.1
N.D.
complex community
Community=guar; Passage=4
+0.5
+0.1
N.D.
+0.1
N.D.
complex community
Community=guar; Passage=4
+0.3
+0.3
N.D.
+0.1
N.D.
complex community
Community=guar; Passage=4
+0.5
+0.1
N.D.
+0.2
N.D.
phage
phage_bap4
+0.7
+0.0
N.D.
+0.1
N.D.
phage
phage_bap4
+0.8
+0.0
N.D.
+0.0
N.D.
complex community
Community=Locust bean gum; Passage=4
+0.6
+0.2
N.D.
+0.1
N.D.
phage
phage_bap4
+0.7
+0.1
N.D.
+0.1
N.D.
complex community
Community=guar; Passage=4
+0.7
+0.4
N.D.
+0.1
N.D.
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