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Cofit
Protein
Homologs
Fitness for 5 genes in
Hydrogenophaga sp. GW460-11-11-14-LB1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF5821 and GFF5822 are separated by 3 nucleotides
GFF5822 and GFF5823 overlap by 4 nucleotides
GFF5823 and GFF5824 are separated by 195 nucleotides
GFF5824 and GFF5825 are separated by 19 nucleotides
GFF5821 - Nitrite-sensitive transcriptional repressor NsrR, at 15,367 to 15,879
GFF5821
GFF5822 - Nitrate/nitrite sensor protein (EC 2.7.3.-), at 15,883 to 17,799
GFF5822
GFF5823 - Nitrate/nitrite response regulator protein, at 17,796 to 18,488
GFF5823
GFF5824 - Nitrate/nitrite transporter, at 18,684 to 19,976
GFF5824
GFF5825 - Nitrate/nitrite transporter, at 19,996 to 21,624
GFF5825
Group
Condition
GFF5821
GFF5822
GFF5823
GFF5824
GFF5825
carbon source
Ying_Nucleobase14 rep B; time point 1
-0.4
-0.3
N.D.
+0.1
-0.3
carbon source
Ying_Others16 rep A; time point 1
-0.1
-0.2
N.D.
-0.2
-0.3
carbon source
Ying_Others16 rep C; time point 3
-0.2
-0.3
N.D.
-0.2
-0.0
carbon source
Ying_Nucleobase14 rep A; time point 1
-0.4
-0.4
N.D.
+0.1
-0.1
carbon source
Ying_AminoAcid20 rep A; time point 1
+0.0
-0.3
N.D.
-0.2
-0.1
carbon source
Ying_OrganicAcid7 rep C; time point 2
-0.3
-0.1
N.D.
-0.0
-0.2
carbon source
Ying_all64 rep C; time point 1
-0.2
-0.2
N.D.
+0.0
-0.2
carbon source
Ying_all64 rep C; time point 3
-1.3
+1.0
N.D.
+0.1
-0.2
carbon source
Ying_all64 rep A; time point 2
-0.2
+0.1
N.D.
-0.0
-0.4
carbon source
Ying_sugar7 rep A; time point 2
-0.4
-0.0
N.D.
-0.1
+0.1
carbon source
Ying_Nucleobase14 rep A; time point 2
+0.1
-0.2
N.D.
-0.3
-0.1
carbon source
Ying_Nucleobase14 rep B; time point 2
-0.5
-0.1
N.D.
+0.1
+0.1
carbon source
Ying_AminoAcid20 rep C; time point 2
+0.2
-0.1
N.D.
+0.0
-0.5
carbon source
Ying_OrganicAcid7 rep C; time point 1
-0.3
-0.1
N.D.
-0.1
+0.1
carbon source
Ying_OrganicAcid7 rep A; time point 1
-0.2
-0.2
N.D.
+0.0
+0.1
carbon source
Ying_Others16 rep C; time point 2
-0.4
-0.1
N.D.
-0.1
+0.3
carbon source
Ying_sugar7 rep A; time point 1
+0.0
-0.2
N.D.
-0.2
+0.2
carbon source
Ying_Others16 rep A; time point 3
-0.5
+0.1
N.D.
-0.1
+0.3
carbon source
Ying_sugar7 rep C; time point 3
+0.2
-0.1
N.D.
-0.3
+0.0
carbon source
Ying_OrganicAcid7 rep A; time point 2
-0.3
+0.2
N.D.
-0.0
+0.1
carbon source
Ying_all64 rep C; time point 2
-0.6
+0.4
N.D.
+0.0
+0.2
carbon source
Ying_Nucleobase14 rep C; time point 1
-0.1
-0.2
N.D.
-0.0
+0.3
carbon source
Ying_Others16 rep B; time point 3
+0.2
-0.2
N.D.
-0.1
+0.1
carbon source
Ying_all64 rep B; time point 2
+0.0
+0.1
N.D.
-0.2
+0.2
carbon source
Ying_OrganicAcid7 rep C; time point 3
-0.0
+0.8
N.D.
-0.2
-0.1
carbon source
Ying_sugar7 rep C; time point 2
+0.0
-0.0
N.D.
+0.2
+0.3
carbon source
Ying_all64 rep A; time point 3
+0.0
+0.8
N.D.
+0.1
-0.1
carbon source
Ying_all64 rep B; time point 3
+0.2
+0.7
N.D.
-0.3
+0.2
carbon source
Ying_OrganicAcid7 rep B; time point 3
+0.0
+1.1
N.D.
-0.1
+0.2
carbon source
Ying_OrganicAcid7 rep A; time point 3
+0.2
+1.3
N.D.
-0.2
+0.2
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