Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF5810 and GFF5811 overlap by 4 nucleotidesGFF5811 and GFF5812 are separated by 18 nucleotidesGFF5812 and GFF5813 overlap by 4 nucleotidesGFF5813 and GFF5814 are separated by 116 nucleotides GFF5810 - Multidrug efflux system MdtABC-TolC, membrane fusion component MdtA, at 186,470 to 187,705 GFF5810 GFF5811 - Multidrug efflux system MdtABC-TolC, inner-membrane proton/drug antiporter MdtB-like, at 187,702 to 190,872 GFF5811 GFF5812 - DNA-binding heavy metal response regulator, at 190,891 to 191,631 GFF5812 GFF5813 - Heavy metal sensor histidine kinase, at 191,628 to 193,025 GFF5813 GFF5814 - Rhodanese-related sulfurtransferase, at 193,142 to 194,080 GFF5814
Group Condition GFF5810 GFF5811 GFF5812 GFF5813 GFF5814
complex community Community=Locust bean gum; Passage=4 -0.6 -0.2 +0.1 -1.0 -3.4
complex community Community=Kojac gum; Passage=4 -0.4 +0.4 -0.1 -4.0 -0.3
complex community Community=Locust bean gum; Passage=4 -0.3 +0.3 -0.9 -1.5 -0.6
vitamin M9 with Supernatant from Cyptococcus -0.2 -0.4 -0.2 -0.7 -0.7
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.3 -0.1 +0.0 -1.2 -0.6
complex community Community=guar; Passage=4 -0.3 +0.3 -0.3 -2.1 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 -0.2 -0.3 -1.4 +0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.0 -0.1 -1.4 -0.1 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 -0.3 -1.0 -0.4 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.2 -0.1 +0.5 -2.0 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.3 -0.1 -0.6 -0.3 -0.1
vitamin M9 with Supernatant from Cyptococcus -0.2 -0.2 -0.1 -0.9 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.3 -0.2 -0.2 -0.7 +0.1
no phage control no phage control -0.2 +0.1 -0.8 +0.1 -0.3
complex community Community=Locust bean gum; Passage=4 -0.2 +0.1 +0.7 -1.7 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.0 -0.2 +0.1 -0.9 +0.2
complex community Community=Locust bean gum; Passage=4 -0.3 +0.1 -0.1 +0.9 -1.5
complex community Community=arabino-guar; Passage=4 -0.1 -0.1 -0.7 +0.7 -0.8
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.2 -0.5 +0.3 -0.7 -0.1
complex community Community=guar; Passage=4 +0.2 -0.1 +0.1 -0.8 -0.1
phage phage_bap4 +0.1 +0.2 -0.6 -0.4 +0.2
complex community Community=guar; Passage=4 -0.4 -0.2 +0.4 +0.6 -0.6
complex community Community=guar; Passage=4 -0.3 -0.0 -1.1 +0.5 +0.9
no phage control no phage control -0.2 +0.3 -0.2 +0.5 +0.2
complex community Community=arabino-guar; Passage=4 +0.5 +0.1 -0.9 +0.7 +0.6
phage phage_bap4 +0.2 +0.3 -0.1 +0.6 +0.3
complex community Community=arabino-guar; Passage=4 -0.6 -0.1 +0.5 +0.7 +1.0
complex community Community=arabino-guar; Passage=4 -0.3 +0.2 +1.1 +0.6 -0.1
phage phage_bap4 -0.1 +0.4 +0.2 +0.4 +1.0
phage phage_bap4 +0.2 +0.3 +0.6 +0.4 +0.4
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