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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF5761 and GFF5762 are separated by 36 nucleotides
GFF5762 and GFF5763 are separated by 50 nucleotides
GFF5763 and GFF5764 are separated by 19 nucleotides
GFF5764 and GFF5765 are separated by 100 nucleotides
GFF5761 - Flagellar motor rotation protein MotA, at 132,672 to 133,532
GFF5761
GFF5762 - Flagellar motor rotation protein MotB, at 133,569 to 134,534
GFF5762
GFF5763 - Signal transduction histidine kinase CheA, at 134,585 to 136,681
GFF5763
GFF5764 - hypothetical protein, at 136,701 to 138,008
GFF5764
GFF5765 - Chemotaxis protein methyltransferase CheR (EC 2.1.1.80), at 138,109 to 138,942
GFF5765
Group
Condition
GFF5761
GFF5762
GFF5763
GFF5764
GFF5765
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.1
-1.1
-0.2
-0.8
-0.3
complex community
Community=Locust bean gum; Passage=4
-0.1
-1.4
-0.0
-0.1
-0.1
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
-0.1
-1.4
+0.0
-0.2
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.1
-1.2
+0.1
-0.2
-0.0
complex community
Community=guar; Passage=4
+0.1
-1.3
-0.1
-0.1
+0.0
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.1
-0.9
-0.1
-0.2
-0.1
complex community
Community=guar; Passage=4
+0.1
+0.0
-0.0
-0.9
-0.3
complex community
Community=Locust bean gum; Passage=4
-0.1
+0.5
-0.2
-2.0
+0.6
complex community
Community=arabino-guar; Passage=4
+0.0
-1.3
-0.1
+0.0
+0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.1
-0.7
+0.2
-0.1
-0.1
vitamin
M9 with Supernatant from Cyptococcus
+0.0
-0.3
+0.1
-0.6
+0.1
complex community
Community=Locust bean gum; Passage=1
+0.0
-0.8
-0.3
+0.0
+0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.0
-0.5
+0.2
-0.2
-0.2
complex community
Community=Kojac gum; Passage=4
+0.1
+0.6
-0.3
-0.8
-0.2
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
+0.1
-0.5
+0.0
-0.3
+0.1
complex community
Community=guar; Passage=4
+0.5
-0.3
+0.0
-0.9
+0.2
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.0
-0.8
+0.1
+0.1
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.0
-0.9
+0.2
+0.1
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.2
-0.8
+0.1
+0.4
-0.1
phage
phage_bap4
-0.0
-0.3
+0.3
+0.2
-0.3
phage
phage_bap4
-0.0
+0.2
+0.3
-0.4
-0.2
phage
phage_bap4
-0.1
-0.4
+0.5
+0.0
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.3
+0.4
+0.1
+0.1
+0.2
vitamin
M9 with Supernatant from Cyptococcus
+0.3
+0.4
+0.1
-0.3
-0.0
complex community
Community=arabino-guar; Passage=4
+0.2
+0.7
+0.0
+0.3
-0.7
complex community
Community=Locust bean gum; Passage=4
+0.6
+0.0
-0.5
+0.6
-0.2
phage
phage_bap4
+0.1
+0.8
+0.1
-0.1
-0.1
complex community
Community=arabino-guar; Passage=4
+0.8
-1.1
+0.4
+0.5
+0.4
complex community
Community=Locust bean gum; Passage=4
+0.2
+0.8
+0.0
-0.4
+0.6
complex community
Community=arabino-guar; Passage=4
+0.9
+0.2
-0.6
+0.7
+0.1
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