Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF5754 and GFF5755 are separated by 40 nucleotidesGFF5755 and GFF5756 are separated by 40 nucleotidesGFF5756 and GFF5757 are separated by 29 nucleotidesGFF5757 and GFF5758 overlap by 4 nucleotides GFF5754 - Flagellar cap protein FliD, at 127,402 to 128,847 GFF5754 GFF5755 - Flagellar biosynthesis protein FliS, at 128,888 to 129,307 GFF5755 GFF5756 - KEGG: flagellar protein FliT, at 129,348 to 129,680 GFF5756 GFF5757 - hypothetical protein, at 129,710 to 131,014 GFF5757 GFF5758 - Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB, at 131,011 to 131,310 GFF5758
Group Condition GFF5754 GFF5755 GFF5756 GFF5757 GFF5758
complex community Community=guar; Passage=4 -0.0 -0.4 -1.5 +0.7 -0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 -0.5 -1.1 +0.1 -0.1
complex community Community=arabino-guar; Passage=4 +0.9 +0.1 -1.8 -0.5 +0.0
complex community Community=Kojac gum; Passage=4 -0.2 -0.6 -0.7 +0.3 -0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.2 -0.1 -1.0 -0.1 -0.2
phage phage_bap4 -0.1 -0.6 -0.4 +0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.2 -0.2 -0.8 -0.1 -0.2
complex community Community=Locust bean gum; Passage=4 +0.5 -0.2 -1.8 +0.3 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.0 -0.2 -0.8 +0.2 -0.2
complex community Community=Locust bean gum; Passage=4 -0.7 -0.9 +0.8 +0.1 -0.2
complex community Community=guar; Passage=4 +0.3 -0.3 -0.6 -0.2 +0.0
phage phage_bap4 -0.2 -0.4 -0.4 +0.2 +0.1
complex community Community=arabino-guar; Passage=4 +0.3 -0.2 +0.0 -0.5 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL +0.2 -0.2 -0.8 +0.2 +0.1
vitamin M9 with Supernatant from Cyptococcus +0.0 -0.4 -0.5 +0.4 -0.1
no phage control no phage control +0.2 -0.7 -0.1 +0.2 +0.0
phage phage_bap4 +0.1 -0.3 -0.7 +0.2 +0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.4 -0.4 -0.5 +0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus +0.3 -0.5 +0.3 -0.1 -0.1
complex community Community=arabino-guar; Passage=4 -0.5 +0.1 +1.1 -0.5 -0.2
phage phage_bap4 +0.1 -0.8 +0.6 +0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 -0.6 +0.7 -0.1 -0.1
complex community Community=guar; Passage=4 +0.8 +0.0 +0.1 -0.1 -0.4
phage phage_bap4 -0.2 +0.1 +0.8 -0.3 +0.1
vitamin M9 with Supernatant from Cyptococcus +0.2 -0.5 +0.6 +0.1 +0.0
vitamin M9 with Supernatant from Cyptococcus +0.2 -0.3 +0.6 +0.0 -0.0
complex community Community=Locust bean gum; Passage=1 +0.2 -0.1 +0.5 +0.3 -0.3
complex community Community=guar; Passage=4 +0.1 -0.4 +0.9 +0.5 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.2 -0.2 +0.6 +0.3 +0.1
complex community Community=Locust bean gum; Passage=4 +0.2 +0.7 +0.4 +0.2 -0.0
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