Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF5738 and GFF5739 overlap by 4 nucleotidesGFF5739 and GFF5740 are separated by 11 nucleotidesGFF5740 and GFF5741 overlap by 4 nucleotidesGFF5741 and GFF5742 overlap by 4 nucleotides GFF5738 - Flagellar biosynthesis protein FliR, at 112,961 to 113,758 GFF5738 GFF5739 - Flagellar biosynthesis protein FliQ, at 113,755 to 114,024 GFF5739 GFF5740 - Flagellar biosynthesis protein FliP, at 114,036 to 114,794 GFF5740 GFF5741 - Flagellar biosynthesis protein FliO, at 114,791 to 115,294 GFF5741 GFF5742 - Flagellar motor switch protein FliN, at 115,291 to 115,761 GFF5742
Group Condition GFF5738 GFF5739 GFF5740 GFF5741 GFF5742
complex community Community=Kojac gum; Passage=4 +1.1 -2.8 N.D. N.D. -2.3
complex community Community=arabino-guar; Passage=4 +0.7 -2.8 N.D. N.D. -1.2
complex community Community=Locust bean gum; Passage=4 -0.4 -2.7 N.D. N.D. +0.1
complex community Community=Locust bean gum; Passage=4 +0.6 -2.8 N.D. N.D. -0.3
complex community Community=Locust bean gum; Passage=4 +1.2 -2.9 N.D. N.D. -0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 -2.1 N.D. N.D. +0.3
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 -2.0 N.D. N.D. +0.3
complex community Community=guar; Passage=4 -1.6 +0.2 N.D. N.D. -0.2
complex community Community=arabino-guar; Passage=4 +0.9 -3.0 N.D. N.D. +0.5
complex community Community=guar; Passage=4 -1.0 -0.6 N.D. N.D. +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.9 -0.3 N.D. N.D. -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.0 -1.2 N.D. N.D. -0.3
vitamin M9 with Supernatant from Cyptococcus +0.3 -2.1 N.D. N.D. +0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 -1.2 N.D. N.D. +0.2
complex community Community=arabino-guar; Passage=4 +0.5 -1.1 N.D. N.D. -0.3
complex community Community=arabino-guar; Passage=4 +0.3 +0.4 N.D. N.D. -1.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 +0.4 N.D. N.D. -1.3
vitamin M9 with Supernatant from Cyptococcus -0.3 -0.6 N.D. N.D. +0.2
vitamin M9 with calcium pantothenate 10 mg/mL +1.2 -0.9 N.D. N.D. -0.7
complex community Community=Locust bean gum; Passage=1 +0.9 -1.5 N.D. N.D. +0.4
vitamin M9 with Supernatant from Cyptococcus -0.3 +1.1 N.D. N.D. -0.2
no phage control no phage control +0.5 -0.3 N.D. N.D. +0.4
no phage control no phage control -0.4 +0.8 N.D. N.D. +0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.6 +0.6 N.D. N.D. -0.1
no phage control no phage control +0.5 +0.5 N.D. N.D. +0.2
complex community Community=guar; Passage=4 +0.9 +2.0 N.D. N.D. -1.7
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 +0.9 N.D. N.D. +0.2
no phage control no phage control +0.3 +0.7 N.D. N.D. +0.4
phage phage_bap4 +0.4 +0.3 N.D. N.D. +0.7
complex community Community=Locust bean gum; Passage=4 +1.3 -0.3 N.D. N.D. +0.8
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