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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF5731 and GFF5732 are separated by 14 nucleotides
GFF5732 and GFF5733 are separated by 150 nucleotides
GFF5733 and GFF5734 are separated by 101 nucleotides
GFF5734 and GFF5735 are separated by 95 nucleotides
GFF5731 - Methyl-accepting chemotaxis sensor/transducer protein, at 101,513 to 103,114
GFF5731
GFF5732 - Methyl-accepting chemotaxis sensor/transducer protein, at 103,129 to 104,832
GFF5732
GFF5733 - Methyl-accepting chemotaxis sensor/transducer protein, at 104,983 to 106,617
GFF5733
GFF5734 - Methyl-accepting chemotaxis sensor/transducer protein, at 106,719 to 108,449
GFF5734
GFF5735 - Flagellar hook-associated protein FlgK, at 108,545 to 110,509
GFF5735
Group
Condition
GFF5731
GFF5732
GFF5733
GFF5734
GFF5735
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.4
+0.2
-0.6
-1.3
-0.0
complex community
Community=arabino-guar; Passage=4
-0.6
+0.2
-0.4
-0.8
-0.2
phage
phage_bap4
-0.3
+0.0
-0.4
-1.0
+0.1
no phage control
no phage control
+0.2
+0.0
-0.3
-1.5
+0.1
complex community
Community=guar; Passage=4
-0.2
+0.4
-0.6
-1.0
+0.0
complex community
Community=Locust bean gum; Passage=4
+0.9
-0.4
-1.5
-0.3
-0.1
phage
phage_bap4
-0.0
-0.6
-0.4
-0.5
+0.1
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
+0.7
-0.3
-0.3
-0.7
-0.4
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.2
-0.6
-0.3
+0.5
-0.3
phage
phage_bap4
-0.5
-0.4
-0.6
+0.5
+0.2
complex community
Community=guar; Passage=4
-0.2
+0.3
+1.0
-1.9
+0.4
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.0
-0.4
+0.6
-0.7
-0.0
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.1
-0.3
-0.5
+0.6
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.6
+0.3
+0.5
-0.5
+0.2
phage
phage_bap4
-0.2
+0.1
-0.6
+0.5
+0.2
complex community
Community=arabino-guar; Passage=4
-1.0
+0.9
-0.0
+0.8
-0.7
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.4
-0.4
+0.4
+0.1
-0.4
complex community
Community=Locust bean gum; Passage=4
-0.3
+1.0
-0.9
+0.2
+0.1
phage
phage_bap4
+0.2
-0.2
-0.4
+0.6
-0.1
complex community
Community=Locust bean gum; Passage=4
+0.8
-0.3
-0.6
-0.3
+0.7
complex community
Community=Locust bean gum; Passage=4
+0.0
+0.4
-0.1
+1.3
-1.1
complex community
Community=arabino-guar; Passage=4
+0.5
-0.2
+0.7
-0.2
-0.2
vitamin
M9 with Supernatant from Cyptococcus
+0.2
-0.7
-0.0
+1.1
+0.0
complex community
Community=guar; Passage=4
+0.2
-0.5
-0.6
+1.5
+0.2
complex community
Community=Kojac gum; Passage=1
-0.3
+0.3
+0.1
+0.7
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.3
-0.3
+0.4
+0.9
-0.1
complex community
Community=Locust bean gum; Passage=1
+0.3
+0.4
+0.3
+1.0
-0.1
complex community
Community=arabino-guar; Passage=4
+0.4
+0.5
+0.3
+0.9
+0.2
complex community
Community=Kojac gum; Passage=4
+1.0
+0.8
-0.1
+0.3
+0.5
complex community
Community=guar; Passage=4
-0.6
+0.3
+1.4
+1.9
+0.5
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