Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF5727 and GFF5728 are separated by 104 nucleotidesGFF5728 and GFF5729 are separated by 16 nucleotidesGFF5729 and GFF5730 are separated by 20 nucleotidesGFF5730 and GFF5731 are separated by 67 nucleotides GFF5727 - Methyl-accepting chemotaxis sensor/transducer protein, at 95,876 to 97,612 GFF5727 GFF5728 - Methyl-accepting chemotaxis sensor/transducer protein, at 97,717 to 99,282 GFF5728 GFF5729 - Methyl-accepting chemotaxis sensor/transducer protein, at 99,299 to 100,903 GFF5729 GFF5730 - Positive regulator of CheA protein activity (CheW), at 100,924 to 101,445 GFF5730 GFF5731 - Methyl-accepting chemotaxis sensor/transducer protein, at 101,513 to 103,114 GFF5731
Group Condition GFF5727 GFF5728 GFF5729 GFF5730 GFF5731
complex community Community=guar; Passage=4 -2.9 -0.1 -1.2 N.D. -0.6
complex community Community=Locust bean gum; Passage=4 -1.5 +0.9 -2.5 N.D. -0.3
complex community Community=arabino-guar; Passage=4 -1.0 -0.5 -0.7 N.D. -1.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -1.4 -0.3 +0.2 N.D. -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -1.1 -0.7 +0.0 N.D. -0.4
complex community Community=arabino-guar; Passage=4 -1.2 -1.3 -0.1 N.D. +0.4
complex community Community=arabino-guar; Passage=4 -2.0 +0.6 +0.3 N.D. -0.6
phage phage_bap4 -0.9 -0.0 -0.5 N.D. -0.1
vitamin M9 with Supernatant from Cyptococcus -0.6 -0.0 -0.4 N.D. -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -1.2 -0.2 +0.2 N.D. -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -1.3 +0.3 +0.0 N.D. -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -1.3 +0.2 -0.2 N.D. -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.9 -0.1 +0.2 N.D. -0.3
complex community Community=Kojac gum; Passage=4 -0.3 -0.0 -1.5 N.D. +1.0
complex community Community=guar; Passage=4 -0.5 -0.4 +0.3 N.D. -0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -1.1 +0.1 +0.3 N.D. +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -1.2 +0.2 +0.1 N.D. +0.4
phage phage_bap4 +0.6 -0.2 -0.1 N.D. -0.5
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.0 -0.7 -0.1 N.D. +0.7
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.5 -0.2 +0.5 N.D. +0.1
phage phage_bap4 +0.8 -0.2 -0.3 N.D. -0.0
complex community Community=Locust bean gum; Passage=4 +0.8 -0.8 -0.5 N.D. +0.8
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.3 +0.6 +0.2 N.D. -0.2
phage phage_bap4 +1.0 -0.5 +0.0 N.D. -0.2
complex community Community=arabino-guar; Passage=4 -1.6 +1.4 +0.1 N.D. +0.5
no phage control no phage control +0.7 -0.5 +0.1 N.D. +0.3
no phage control no phage control +0.8 -0.1 -0.4 N.D. +0.3
phage phage_bap4 +0.9 -0.2 -0.1 N.D. +0.2
complex community Community=Locust bean gum; Passage=4 +2.0 -1.2 +0.3 N.D. +0.9
complex community Community=Locust bean gum; Passage=4 +1.5 +1.1 +0.2 N.D. +0.0
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