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Cofit
Protein
Homologs
Fitness for 5 genes in
Hydrogenophaga sp. GW460-11-11-14-LB1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF5723 and GFF5724 overlap by 4 nucleotides
GFF5724 and GFF5725 are separated by 14 nucleotides
GFF5725 and GFF5726 are separated by 52 nucleotides
GFF5726 and GFF5727 are separated by 47 nucleotides
GFF5723 - polar amino acid ABC transporter, inner membrane subunit, at 2,753,163 to 2,753,855
GFF5723
GFF5724 - Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1), at 2,753,852 to 2,754,523
GFF5724
GFF5725 - ABC transporter, nucleotide binding/ATPase protein, at 2,754,538 to 2,755,266
GFF5725
GFF5726 - extracellular solute-binding protein, family 3, at 2,755,319 to 2,756,113
GFF5726
GFF5727 - FIG00456379: hypothetical protein, at 2,756,161 to 2,756,703
GFF5727
Group
Condition
GFF5723
GFF5724
GFF5725
GFF5726
GFF5727
carbon source
Ying_OrganicAcid7 rep C; time point 2
-0.3
-0.1
-0.1
-2.2
+0.2
carbon source
Ying_all64 rep C; time point 2
-0.0
-0.2
-0.2
-1.3
-0.3
carbon source
Ying_sugar7 rep C; time point 3
+0.1
+0.1
-0.1
-1.8
-0.2
carbon source
Ying_AminoAcid20 rep C; time point 1
-0.1
-0.1
-0.0
-1.7
+0.3
carbon source
Ying_all64 rep B; time point 2
+0.2
-0.1
+0.1
-1.6
-0.1
carbon source
Ying_Nucleobase14 rep A; time point 1
-0.1
-0.1
-0.0
-1.3
-0.0
carbon source
Ying_sugar7 rep A; time point 2
-0.2
+0.0
-0.1
-1.4
+0.2
carbon source
Ying_AminoAcid20 rep A; time point 2
-0.1
-0.2
+0.0
-0.7
-0.2
carbon source
Ying_Others16 rep A; time point 2
-0.0
-0.1
-0.1
-1.1
+0.2
carbon source
Ying_OrganicAcid7 rep A; time point 1
-0.0
-0.1
+0.1
-0.8
-0.1
carbon source
Ying_OrganicAcid7 rep C; time point 1
-0.0
+0.0
-0.2
-0.7
-0.0
carbon source
Ying_all64 rep B; time point 1
+0.0
-0.1
+0.0
-0.9
+0.1
carbon source
Ying_all64 rep C; time point 3
+0.1
-0.2
-0.2
-0.3
-0.3
carbon source
Ying_Others16 rep B; time point 2
-0.1
-0.1
-0.0
-0.6
+0.1
carbon source
Ying_sugar7 rep C; time point 1
-0.2
-0.1
-0.3
-0.2
+0.1
carbon source
Ying_all64 rep A; time point 2
-0.2
-0.1
-0.2
-0.2
+0.0
carbon source
Ying_all64 rep A; time point 1
+0.2
+0.0
-0.0
-0.6
-0.2
carbon source
Ying_all64 rep C; time point 1
-0.3
-0.1
+0.1
-0.3
+0.0
carbon source
Ying_Others16 rep B; time point 1
-0.0
-0.1
-0.1
-0.4
+0.2
carbon source
Ying_sugar7 rep A; time point 3
+0.2
+0.0
-0.1
-0.5
+0.1
carbon source
Ying_all64 rep B; time point 3
+0.2
+0.0
-0.1
-0.5
+0.1
carbon source
Ying_Nucleobase14 rep C; time point 1
+0.1
+0.1
+0.2
-1.0
+0.4
carbon source
Ying_AminoAcid20 rep B; time point 3
+0.3
-0.0
-0.1
-0.4
+0.2
carbon source
Ying_Others16 rep C; time point 3
+0.1
+0.0
-0.4
+0.3
+0.0
carbon source
Ying_OrganicAcid7 rep B; time point 3
+0.2
-0.2
-0.0
+0.3
-0.0
carbon source
Ying_AminoAcid20 rep C; time point 2
+0.2
+0.1
-0.1
+0.3
-0.1
carbon source
Ying_OrganicAcid7 rep B; time point 1
+0.1
+0.1
-0.1
+0.2
+0.2
carbon source
Ying_sugar7 rep C; time point 2
+0.1
-0.1
+0.1
+0.3
+0.2
carbon source
Ying_AminoAcid20 rep C; time point 3
+0.1
+0.1
+0.1
+0.4
-0.0
carbon source
Ying_Others16 rep B; time point 3
+0.3
+0.1
+0.2
+0.5
+0.1
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