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Cofit
Protein
Homologs
Fitness for 5 genes in
Hydrogenophaga sp. GW460-11-11-14-LB1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF5721 and GFF5722 are separated by 292 nucleotides
GFF5722 and GFF5723 are separated by 123 nucleotides
GFF5723 and GFF5724 overlap by 4 nucleotides
GFF5724 and GFF5725 are separated by 14 nucleotides
GFF5721 - ATP-dependent RNA helicase NGO0650, at 2,749,751 to 2,751,718
GFF5721
GFF5722 - FIG000557: hypothetical protein co-occurring with RecR, at 2,752,011 to 2,753,039
GFF5722
GFF5723 - polar amino acid ABC transporter, inner membrane subunit, at 2,753,163 to 2,753,855
GFF5723
GFF5724 - Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1), at 2,753,852 to 2,754,523
GFF5724
GFF5725 - ABC transporter, nucleotide binding/ATPase protein, at 2,754,538 to 2,755,266
GFF5725
Group
Condition
GFF5721
GFF5722
GFF5723
GFF5724
GFF5725
carbon source
Ying_all64 rep C; time point 3
-0.9
-0.1
+0.1
-0.2
-0.2
carbon source
Ying_all64 rep A; time point 2
-0.6
-0.1
-0.2
-0.1
-0.2
carbon source
Ying_AminoAcid20 rep A; time point 2
-0.7
-0.0
-0.1
-0.2
+0.0
carbon source
Ying_AminoAcid20 rep B; time point 2
-0.7
+0.0
-0.0
-0.2
-0.1
carbon source
Ying_OrganicAcid7 rep C; time point 2
-0.3
-0.0
-0.3
-0.1
-0.1
carbon source
Ying_AminoAcid20 rep B; time point 3
-0.9
-0.1
+0.3
-0.0
-0.1
carbon source
Ying_AminoAcid20 rep C; time point 3
-1.0
-0.1
+0.1
+0.1
+0.1
carbon source
Ying_all64 rep B; time point 3
-0.9
-0.0
+0.2
+0.0
-0.1
carbon source
Ying_all64 rep A; time point 3
-0.8
-0.1
+0.2
+0.0
-0.0
carbon source
Ying_OrganicAcid7 rep B; time point 2
-0.5
-0.0
-0.0
-0.0
-0.2
carbon source
Ying_AminoAcid20 rep A; time point 3
-0.8
-0.0
+0.1
+0.0
-0.1
carbon source
Ying_all64 rep C; time point 2
-0.2
-0.1
-0.0
-0.2
-0.2
carbon source
Ying_Others16 rep A; time point 2
-0.4
-0.1
-0.0
-0.1
-0.1
carbon source
Ying_OrganicAcid7 rep C; time point 1
-0.5
+0.1
-0.0
+0.0
-0.2
carbon source
Ying_all64 rep C; time point 1
-0.4
+0.0
-0.3
-0.1
+0.1
carbon source
Ying_Others16 rep C; time point 3
-0.2
-0.1
+0.1
+0.0
-0.4
carbon source
Ying_AminoAcid20 rep B; time point 1
-0.5
+0.0
-0.0
-0.0
-0.1
carbon source
Ying_OrganicAcid7 rep A; time point 3
-0.6
-0.1
+0.2
+0.0
-0.0
carbon source
Ying_all64 rep B; time point 1
-0.3
-0.1
+0.0
-0.1
+0.0
carbon source
Ying_OrganicAcid7 rep B; time point 1
-0.5
-0.1
+0.1
+0.1
-0.1
carbon source
Ying_OrganicAcid7 rep C; time point 3
-0.7
-0.1
+0.0
+0.1
+0.1
carbon source
Ying_AminoAcid20 rep C; time point 2
-0.6
-0.1
+0.2
+0.1
-0.1
carbon source
Ying_OrganicAcid7 rep B; time point 3
-0.5
-0.0
+0.2
-0.2
-0.0
carbon source
Ying_sugar7 rep C; time point 1
+0.0
+0.1
-0.2
-0.1
-0.3
carbon source
Ying_all64 rep B; time point 2
-0.6
+0.0
+0.2
-0.1
+0.1
carbon source
Ying_sugar7 rep B; time point 3
-0.3
-0.1
+0.1
+0.0
+0.1
carbon source
Ying_all64 rep A; time point 1
-0.5
+0.1
+0.2
+0.0
-0.0
carbon source
Ying_Nucleobase14 rep C; time point 1
-0.2
+0.1
+0.1
+0.1
+0.2
carbon source
Ying_sugar7 rep A; time point 3
+0.2
-0.1
+0.2
+0.0
-0.1
carbon source
Ying_Others16 rep B; time point 3
-0.2
+0.0
+0.3
+0.1
+0.2
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