Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF5686 and GFF5687 overlap by 8 nucleotidesGFF5687 and GFF5688 are separated by 115 nucleotidesGFF5688 and GFF5689 overlap by 25 nucleotidesGFF5689 and GFF5690 overlap by 4 nucleotides GFF5686 - FIG01027227: hypothetical protein, at 62,361 to 62,759 GFF5686 GFF5687 - FIG01027591: hypothetical protein, at 62,752 to 63,306 GFF5687 GFF5688 - Transcriptional regulator, LysR family, at 63,422 to 64,345 GFF5688 GFF5689 - Oxidoreductase, 2OG-Fe(II) oxygenase family, at 64,321 to 65,322 GFF5689 GFF5690 - Glutamate/aspartate ABC transporter, ATP-binding protein GltL (TC 3.A.1.3.4), at 65,319 to 66,062 GFF5690
Group Condition GFF5686 GFF5687 GFF5688 GFF5689 GFF5690
complex community Community=Locust bean gum; Passage=4 -0.5 -0.1 -1.2 -0.9 +0.4
phage phage_bap4 -0.2 -0.5 -0.3 -0.0 -0.5
complex community Community=guar; Passage=4 -0.4 +0.1 -0.3 +0.2 -0.9
complex community Community=Locust bean gum; Passage=4 -0.3 -0.1 +0.3 -0.3 -0.9
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 -0.5 -0.5 +0.0 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.3 -0.2 -0.1 -0.1 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.0 +0.1 -0.9 -0.2 +0.0
complex community Community=arabino-guar; Passage=4 -0.4 -0.3 -0.1 -0.3 +0.1
vitamin M9 with Supernatant from Cyptococcus +0.1 -0.2 -0.3 -0.1 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.3 +0.1 -1.1 +0.2 -0.4
complex community Community=Kojac gum; Passage=1 -0.1 +0.3 -0.6 -0.0 -0.3
complex community Community=guar; Passage=4 +0.1 +0.2 -0.2 -0.0 -0.7
complex community Community=guar; Passage=4 +0.3 +0.4 -1.6 +0.1 +0.4
complex community Community=arabino-guar; Passage=4 +0.0 +0.2 +0.7 -0.3 -1.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 +0.2 +0.2 +0.2 -1.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.2 -0.2 +0.4 -0.1 -0.8
no phage control no phage control -0.3 +0.2 -0.5 +0.1 +0.2
no phage control no phage control -0.4 +0.1 -0.4 +0.1 +0.3
phage phage_bap4 -0.4 -0.4 +0.4 -0.1 +0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 -0.1 -0.6 +0.2 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.3 -0.1 +0.6 -0.1 -0.2
phage phage_bap4 -0.3 -0.2 +0.5 -0.1 +0.3
complex community Community=Locust bean gum; Passage=4 -0.4 -0.1 +0.5 -0.1 +0.4
complex community Community=Locust bean gum; Passage=4 -0.5 +1.1 +0.0 -0.3 +0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.5 -0.2 +0.4 -0.1 -0.0
complex community Community=Kojac gum; Passage=4 +0.2 +1.0 -0.1 -0.0 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 +0.4 +0.8 -0.0 +0.1
complex community Community=arabino-guar; Passage=4 +0.4 +1.2 +0.8 -0.3 -0.8
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.4 +0.3 +0.6 -0.0 +0.2
complex community Community=guar; Passage=4 +0.6 +0.7 +0.7 +0.2 -0.3
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