Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF5671 and GFF5672 are separated by 74 nucleotidesGFF5672 and GFF5673 overlap by 4 nucleotidesGFF5673 and GFF5674 are separated by 79 nucleotidesGFF5674 and GFF5675 overlap by 1 nucleotides GFF5671 - FIG01964566: Predicted membrane protein, hemolysin III homolog, at 45,876 to 46,562 GFF5671 GFF5672 - Dna binding response regulator PrrA (RegA), at 46,637 to 47,182 GFF5672 GFF5673 - Sensor histidine kinase PrrB (RegB) (EC 2.7.3.-), at 47,179 to 48,495 GFF5673 GFF5674 - Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion, at 48,575 to 49,372 GFF5674 GFF5675 - Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-), at 49,372 to 49,779 GFF5675
Group Condition GFF5671 GFF5672 GFF5673 GFF5674 GFF5675
complex community Community=Locust bean gum; Passage=4 +0.1 -2.7 -1.8 -0.0 -0.5
complex community Community=arabino-guar; Passage=4 +0.0 -1.8 -1.0 -0.2 -1.0
complex community Community=arabino-guar; Passage=4 -0.3 -2.2 -1.0 +0.2 -0.4
complex community Community=Locust bean gum; Passage=4 +0.3 -1.6 -1.0 -0.2 -1.0
complex community Community=Locust bean gum; Passage=4 +0.1 -2.2 -0.8 +0.5 -0.5
complex community Community=arabino-guar; Passage=4 +0.1 -0.4 -1.4 +0.0 -1.1
complex community Community=arabino-guar; Passage=4 -0.1 -1.2 -0.6 +0.1 -0.8
complex community Community=Kojac gum; Passage=4 -0.0 -1.4 -0.7 +0.2 -0.6
complex community Community=guar; Passage=4 -0.0 -1.3 -0.6 +0.2 -0.5
complex community Community=guar; Passage=4 +0.0 -0.1 -0.5 -0.4 -0.7
phage phage_bap4 -0.0 -0.3 -0.6 -0.3 -0.3
complex community Community=Locust bean gum; Passage=4 +0.2 -0.5 -1.1 +0.5 -0.6
complex community Community=guar; Passage=4 +0.1 -0.9 -0.3 -0.0 -0.2
phage phage_bap4 +0.0 -0.5 -0.2 -0.2 -0.3
phage phage_bap4 +0.0 -0.2 -0.5 -0.1 -0.2
phage phage_bap4 +0.0 -0.1 +0.1 -0.4 -0.2
no phage control no phage control +0.1 -0.2 -0.2 -0.1 -0.2
phage phage_bap4 +0.1 +0.0 -0.2 -0.2 -0.3
no phage control no phage control +0.1 -0.3 +0.0 -0.2 -0.2
phage phage_bap4 +0.1 +0.2 -0.2 -0.1 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 -0.5 +0.2 +0.0 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 -0.6 +0.1 +0.2 -0.0
complex community Community=guar; Passage=4 -0.1 -0.2 -0.0 +0.4 -0.3
vitamin M9 with Supernatant from Cyptococcus -0.1 -0.5 +0.4 +0.0 +0.2
vitamin M9 with Supernatant from Cyptococcus +0.1 -0.1 +0.3 +0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 +0.6 +0.1 +0.1 -0.0
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.1 +0.2 +0.6 -0.1 +0.2
vitamin M9 with Supernatant from Cyptococcus -0.1 +0.5 +0.3 +0.1 +0.4
vitamin M9 with Supernatant from Cyptococcus -0.0 +0.4 +0.2 +0.4 +0.1
vitamin M9 with Supernatant from Cyptococcus +0.1 +0.4 +0.5 +0.1 +0.2
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