Fitness for 5 genes in Hydrogenophaga sp. GW460-11-11-14-LB1

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500 ntGFF5666 and GFF5667 overlap by 4 nucleotidesGFF5667 and GFF5668 overlap by 4 nucleotidesGFF5668 and GFF5669 are separated by 2 nucleotidesGFF5669 and GFF5670 are separated by 22 nucleotides GFF5666 - Hydroxymethylglutaryl-CoA synthase (EC 2.3.3.10), at 2,690,022 to 2,691,500 GFF5666 GFF5667 - 6-hexanolactone hydrolase, at 2,691,497 to 2,692,399 GFF5667 GFF5668 - 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100), at 2,692,396 to 2,693,145 GFF5668 GFF5669 - Enoyl-CoA hydratase (EC 4.2.1.17), at 2,693,148 to 2,693,984 GFF5669 GFF5670 - Benzoate 1,2-dioxygenase beta subunit (EC 1.14.12.10), at 2,694,007 to 2,694,492 GFF5670
Group Condition GFF5666 GFF5667 GFF5668 GFF5669 GFF5670
carbon source Ying_Others16 rep B; time point 2 -0.4 -1.8 N.D. N.D. -1.3
carbon source Ying_Nucleobase14 rep A; time point 1 -0.8 -0.5 N.D. N.D. -1.0
carbon source Ying_all64 rep A; time point 2 -0.4 -1.1 N.D. N.D. -0.9
carbon source Ying_OrganicAcid7 rep B; time point 2 -0.7 -0.5 N.D. N.D. -0.7
carbon source Ying_Nucleobase14 rep B; time point 2 -0.8 -0.8 N.D. N.D. -0.3
carbon source Ying_Others16 rep A; time point 2 -0.5 -0.8 N.D. N.D. -0.7
carbon source Ying_OrganicAcid7 rep C; time point 3 +0.5 -1.9 N.D. N.D. -0.5
carbon source Ying_sugar7 rep B; time point 1 -0.2 -1.0 N.D. N.D. -0.6
carbon source Ying_Others16 rep C; time point 2 -0.8 -0.5 N.D. N.D. -0.4
carbon source Ying_all64 rep B; time point 1 -0.6 -1.0 N.D. N.D. +0.1
carbon source Ying_Nucleobase14 rep C; time point 1 -0.7 +0.1 N.D. N.D. -0.9
carbon source Ying_OrganicAcid7 rep A; time point 1 -0.8 -0.3 N.D. N.D. -0.4
carbon source Ying_all64 rep C; time point 3 -0.5 -0.7 N.D. N.D. -0.2
carbon source Ying_Others16 rep C; time point 1 -0.2 -0.2 N.D. N.D. -0.9
carbon source Ying_OrganicAcid7 rep B; time point 1 -0.3 -0.7 N.D. N.D. -0.4
carbon source Ying_AminoAcid20 rep C; time point 1 -0.3 -0.7 N.D. N.D. -0.3
carbon source Ying_Nucleobase14 rep B; time point 1 -0.3 -0.1 N.D. N.D. -0.8
carbon source Ying_sugar7 rep A; time point 2 -0.7 -0.6 N.D. N.D. +0.1
carbon source Ying_OrganicAcid7 rep A; time point 2 -0.3 -0.3 N.D. N.D. -0.5
carbon source Ying_AminoAcid20 rep A; time point 3 +0.1 -0.2 N.D. N.D. -0.7
carbon source Ying_Others16 rep A; time point 1 +0.6 -1.1 N.D. N.D. -0.3
carbon source Ying_all64 rep C; time point 2 +0.6 -1.4 N.D. N.D. +0.1
carbon source Ying_sugar7 rep B; time point 3 -0.8 -0.1 N.D. N.D. +0.3
carbon source Ying_all64 rep A; time point 3 +0.5 -0.8 N.D. N.D. +0.2
carbon source Ying_AminoAcid20 rep A; time point 1 -0.4 +0.6 N.D. N.D. -0.3
carbon source Ying_AminoAcid20 rep A; time point 2 +0.0 -0.7 N.D. N.D. +0.6
carbon source Ying_all64 rep C; time point 1 +0.3 -0.6 N.D. N.D. +0.3
carbon source Ying_sugar7 rep C; time point 2 -0.6 +0.6 N.D. N.D. +0.0
carbon source Ying_OrganicAcid7 rep B; time point 3 -0.2 +0.7 N.D. N.D. +0.5
carbon source Ying_Others16 rep A; time point 3 +0.4 +0.1 N.D. N.D. +1.0
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