Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_02870	PS417_02875	PS417_02880	PS417_02885	PS417_02890
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-2.1	N.D.	-2.8	-0.7	-1.0
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-1.3	N.D.	-1.7	-3.0	-0.0
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-1.3	N.D.	-2.1	-1.1	-1.3
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-1.1	N.D.	-2.8	-1.4	-0.2
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-1.3	N.D.	-2.8	-1.3	+0.0
solid stress	Scopoletin 2 mM; solid stress	-0.9	N.D.	-3.6	-0.8	+0.0
temperature	LB_noSalt 30C	-1.8	N.D.	+0.1	-3.1	-0.3
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-0.6	N.D.	-2.0	-1.1	-1.0
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.7	N.D.	-2.1	-1.3	-0.6
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.8	N.D.	-1.8	-1.4	-0.3
stress	NaCl stress 25 mM	-1.2	N.D.	-1.5	-1.3	+0.0
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.2	N.D.	-2.9	-0.8	+0.0
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-1.5	N.D.	-1.4	-0.7	-0.3
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.5	N.D.	-1.4	-1.4	-0.5
solid stress	Scopoletin 3 mM; solid stress	-0.7	N.D.	-1.5	-1.5	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-1.2	N.D.	-1.3	-0.6	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.3	N.D.	-3.6	-0.3	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.2	N.D.	-1.0	-1.0	-0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.6	N.D.	-2.3	-0.5	-0.3
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.9	N.D.	-1.1	-1.0	-0.5
solid stress	80% Methanol 3 mM; solid stress	-0.6	N.D.	-2.3	-0.6	+0.1
solid stress	Fraxetin 2 mM; solid stress	-0.3	N.D.	-1.1	-2.0	+0.1
solid stress	Scopoletin 1 mM; solid stress	-0.6	N.D.	-2.4	-0.5	+0.4
agar plate interaction control	Taped volatile agar plate with no fungus	-0.2	N.D.	-3.7	+0.5	+0.2
supernatant	LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	+0.2	N.D.	-3.2	+0.1	-0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.9	N.D.	+1.9	-2.0	-0.1
solid stress	Fraxetin 3 mM; solid stress	+0.2	N.D.	-2.3	+1.0	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.4	N.D.	-0.4	-1.4	+1.4
solid stress	Fraxetin 3 mM; solid stress	+0.4	N.D.	-1.4	+1.0	+0.7
stress	TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 2500 uM; timepoint 1	-0.5	N.D.	+1.5	+1.1	+0.5