Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF564 and GFF565 overlap by 4 nucleotidesGFF565 and GFF566 overlap by 4 nucleotidesGFF566 and GFF567 overlap by 7 nucleotidesGFF567 and GFF568 are separated by 223 nucleotides GFF564 - hypothetical protein, at 611,776 to 612,459 GFF564 GFF565 - Prepilin-type cleavage/methylation-like protein, at 612,456 to 613,271 GFF565 GFF566 - Type IV fimbrial biogenesis protein PilV, at 613,268 to 613,825 GFF566 GFF567 - KEGG: type IV fimbrial biogenesis protein FimT, at 613,819 to 614,346 GFF567 GFF568 - Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193), at 614,570 to 615,667 GFF568
Group Condition GFF564 GFF565 GFF566 GFF567 GFF568
complex community Community=Kojac gum; Passage=4 -0.2 -0.1 -0.1 -0.4 N.D.
complex community Community=arabino-guar; Passage=4 +0.0 -0.1 -0.4 -0.1 N.D.
phage phage_bap4 -0.1 -0.1 -0.2 -0.0 N.D.
phage phage_bap4 -0.1 -0.1 -0.1 -0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 -0.0 -0.2 -0.2 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.0 -0.0 -0.2 -0.0 N.D.
phage phage_bap4 -0.1 -0.2 +0.0 -0.0 N.D.
no phage control no phage control -0.0 -0.1 -0.1 -0.1 N.D.
phage phage_bap4 -0.0 -0.1 -0.1 -0.0 N.D.
phage phage_bap4 -0.1 -0.2 -0.1 +0.0 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.0 -0.0 -0.2 -0.0 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.0 +0.0 -0.2 -0.1 N.D.
complex community Community=guar; Passage=4 +0.1 +0.2 -0.2 -0.3 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.0 +0.0 -0.1 -0.2 N.D.
vitamin M9 with Supernatant from Cyptococcus +0.1 -0.0 -0.2 -0.0 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.0 +0.0 -0.1 -0.2 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.0 +0.0 -0.2 -0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 -0.0 -0.2 -0.0 N.D.
complex community Community=Locust bean gum; Passage=4 -0.0 -0.1 +0.2 -0.2 N.D.
complex community Community=arabino-guar; Passage=4 +0.0 +0.2 -0.3 +0.1 N.D.
complex community Community=arabino-guar; Passage=4 +0.1 +0.0 -0.5 +0.4 N.D.
complex community Community=guar; Passage=4 -0.1 +0.1 -0.2 +0.2 N.D.
vitamin M9 with Supernatant from Cyptococcus +0.1 +0.0 +0.1 -0.1 N.D.
complex community Community=arabino-guar; Passage=4 -0.2 -0.2 +0.1 +0.3 N.D.
vitamin M9 with Supernatant from Cyptococcus +0.2 -0.1 -0.1 +0.2 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 +0.0 -0.1 +0.1 N.D.
complex community Community=Locust bean gum; Passage=4 +0.1 -0.1 -0.1 +0.2 N.D.
complex community Community=guar; Passage=4 +0.1 -0.1 -0.1 +0.4 N.D.
complex community Community=Locust bean gum; Passage=4 +0.0 +0.0 +0.1 +0.3 N.D.
complex community Community=guar; Passage=4 +0.3 -0.0 +0.4 +0.1 N.D.
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