Fitness for 5 genes in Hydrogenophaga sp. GW460-11-11-14-LB1

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500 ntGFF5640 and GFF5641 are separated by 31 nucleotidesGFF5641 and GFF5642 overlap by 1 nucleotidesGFF5642 and GFF5643 overlap by 4 nucleotidesGFF5643 and GFF5644 are separated by 31 nucleotides GFF5640 - Extracellular ligand-binding receptor, at 2,662,222 to 2,663,379 GFF5640 GFF5641 - Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1), at 2,663,411 to 2,664,457 GFF5641 GFF5642 - High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1), at 2,664,457 to 2,665,329 GFF5642 GFF5643 - Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3), at 2,665,326 to 2,667,149 GFF5643 GFF5644 - Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1), at 2,667,181 to 2,667,960 GFF5644
Group Condition GFF5640 GFF5641 GFF5642 GFF5643 GFF5644
carbon source Ying_all64 rep B; time point 1 -0.6 -0.2 -0.1 -0.1 +0.2
carbon source Ying_Nucleobase14 rep C; time point 1 -0.4 +0.3 +0.2 -0.5 -0.3
carbon source Ying_OrganicAcid7 rep A; time point 3 -0.1 -0.6 +0.0 +0.4 -0.1
carbon source Ying_Nucleobase14 rep B; time point 1 -0.5 +0.2 -0.0 +0.1 -0.0
carbon source Ying_Nucleobase14 rep A; time point 2 +0.1 -0.2 -0.4 -0.2 +0.4
carbon source Ying_sugar7 rep C; time point 3 -0.3 -0.2 +0.2 +0.3 +0.0
carbon source Ying_all64 rep C; time point 2 +0.3 -0.5 +0.5 -0.2 -0.0
carbon source Ying_Nucleobase14 rep C; time point 2 +0.3 -0.1 +0.1 -0.2 -0.1
carbon source Ying_Others16 rep C; time point 3 +0.1 +0.0 +0.2 +0.2 -0.4
carbon source Ying_AminoAcid20 rep B; time point 3 -0.3 +0.1 +0.3 +0.2 -0.0
carbon source Ying_OrganicAcid7 rep C; time point 1 +0.3 +0.2 -0.1 +0.1 -0.3
carbon source Ying_all64 rep C; time point 3 +0.4 -0.3 +0.5 +0.1 -0.4
carbon source Ying_sugar7 rep A; time point 3 -0.4 +0.0 +0.2 +0.4 +0.1
carbon source Ying_Others16 rep A; time point 3 +0.2 -0.1 +0.3 +0.1 -0.2
carbon source Ying_sugar7 rep A; time point 2 -0.1 -0.2 +0.2 +0.1 +0.4
carbon source Ying_Nucleobase14 rep A; time point 1 +0.2 -0.1 +0.1 +0.3 -0.2
carbon source Ying_sugar7 rep C; time point 2 +0.6 -0.0 +0.2 -0.5 +0.2
carbon source Ying_sugar7 rep A; time point 1 +0.3 -0.2 +0.3 +0.1 -0.0
carbon source Ying_sugar7 rep B; time point 2 +0.4 -0.3 +0.1 +0.3 -0.0
carbon source Ying_OrganicAcid7 rep A; time point 2 +0.4 -0.1 +0.2 -0.1 +0.2
carbon source Ying_OrganicAcid7 rep C; time point 3 +0.4 -0.0 +0.3 +0.3 -0.3
carbon source Ying_sugar7 rep B; time point 3 -0.1 +0.2 +0.3 +0.5 -0.1
carbon source Ying_Others16 rep B; time point 3 +0.1 -0.0 +0.1 +0.5 +0.0
carbon source Ying_AminoAcid20 rep C; time point 2 +0.2 +0.2 -0.1 +0.1 +0.3
carbon source Ying_Others16 rep C; time point 2 +0.2 +0.2 +0.0 +0.1 +0.3
carbon source Ying_AminoAcid20 rep A; time point 1 +0.5 -0.3 +0.2 +0.1 +0.3
carbon source Ying_Others16 rep B; time point 1 +0.5 -0.1 -0.1 +0.3 +0.3
carbon source Ying_sugar7 rep B; time point 1 +0.2 +0.3 +0.1 +0.2 +0.2
carbon source Ying_OrganicAcid7 rep A; time point 1 +0.5 -0.2 +0.2 +0.2 +0.4
carbon source Ying_AminoAcid20 rep C; time point 3 +0.3 +0.4 +0.1 +0.2 +0.3
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