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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF5634 and GFF5635 are separated by 173 nucleotides
GFF5635 and GFF5636 are separated by 44 nucleotides
GFF5636 and GFF5637 overlap by 4 nucleotides
GFF5637 and GFF5638 are separated by 34 nucleotides
GFF5634 - no description, at 11,120 to 11,296
GFF5634
GFF5635 - Molybdenum ABC transporter permease protein ModB, at 11,470 to 12,153
GFF5635
GFF5636 - Molybdenum ABC transporter, substrate-binding protein ModA, at 12,198 to 12,947
GFF5636
GFF5637 - Molybdenum ABC transporter ATP-binding protein ModC, at 12,944 to 13,732
GFF5637
GFF5638 - no description, at 13,767 to 14,048
GFF5638
Group
Condition
GFF5634
GFF5635
GFF5636
GFF5637
GFF5638
vitamin
M9 with Supernatant from Cyptococcus
-0.4
-0.3
-0.4
-0.4
N.D.
complex community
Community=guar; Passage=4
-0.2
+0.0
-0.6
-0.3
N.D.
complex community
Community=Kojac gum; Passage=4
+0.3
+0.2
-1.5
+0.1
N.D.
phage
phage_bap4
-0.1
-0.1
-0.2
-0.2
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.2
-0.2
-0.5
-0.1
N.D.
vitamin
M9 with Supernatant from Cyptococcus
-0.1
-0.1
-0.3
-0.1
N.D.
phage
phage_bap4
+0.1
+0.0
-0.4
-0.2
N.D.
phage
phage_bap4
-0.4
+0.1
+0.0
-0.2
N.D.
complex community
Community=Locust bean gum; Passage=4
-0.0
-0.5
+0.3
-0.2
N.D.
phage
phage_bap4
-0.4
-0.1
+0.1
-0.0
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.2
-0.1
-0.3
-0.1
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.3
-0.3
-0.2
-0.1
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.3
-0.1
-0.3
-0.2
N.D.
complex community
Community=guar; Passage=4
-0.2
-0.1
-0.4
+0.5
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.2
+0.0
-0.2
-0.2
N.D.
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.1
+0.0
-0.3
+0.1
N.D.
vitamin
M9 with Supernatant from Cyptococcus
+0.3
-0.2
-0.2
-0.0
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.2
-0.1
-0.3
+0.1
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.4
-0.3
-0.1
-0.2
N.D.
complex community
Community=arabino-guar; Passage=4
+0.4
+0.1
-0.3
-0.1
N.D.
no phage control
no phage control
+0.2
-0.1
+0.1
-0.1
N.D.
complex community
Community=Locust bean gum; Passage=1
+0.4
+0.1
-0.2
-0.2
N.D.
complex community
Community=arabino-guar; Passage=4
+0.4
-0.1
-0.1
-0.1
N.D.
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
+0.4
-0.1
-0.0
-0.2
N.D.
complex community
Community=Locust bean gum; Passage=4
+0.3
-0.2
+0.5
-0.3
N.D.
complex community
Community=arabino-guar; Passage=4
-0.1
+0.1
+0.6
-0.2
N.D.
complex community
Community=guar; Passage=4
+0.2
-0.2
+0.5
+0.1
N.D.
complex community
Community=Locust bean gum; Passage=4
+0.7
+0.1
-0.1
-0.1
N.D.
complex community
Community=guar; Passage=4
-0.2
-0.1
+0.7
+0.5
N.D.
complex community
Community=Locust bean gum; Passage=4
+0.6
+0.0
+0.4
-0.1
N.D.
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