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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF5627 and GFF5628 are separated by 2 nucleotides
GFF5628 and GFF5629 are separated by 127 nucleotides
GFF5629 and GFF5630 are separated by 16 nucleotides
GFF5630 and GFF5631 are separated by 112 nucleotides
GFF5627 - [4Fe-4S] cluster assembly scaffold protein Mrp (=ApbC), at 5,067 to 6,158
GFF5627
GFF5628 - Transcriptional regulator Daci_1847, LysR family, at 6,161 to 7,108
GFF5628
GFF5629 - Uncharacterized MFS-type transporter, at 7,236 to 8,933
GFF5629
GFF5630 - hypothetical protein, at 8,950 to 9,528
GFF5630
GFF5631 - DNA-binding domain of ModE, at 9,641 to 9,988
GFF5631
Group
Condition
GFF5627
GFF5628
GFF5629
GFF5630
GFF5631
complex community
Community=guar; Passage=4
-4.7
-0.3
+0.0
-0.4
-1.3
complex community
Community=guar; Passage=4
-4.7
+0.2
+0.1
-0.4
-1.3
complex community
Community=arabino-guar; Passage=4
-4.5
-0.1
-0.2
-0.0
-0.6
complex community
Community=guar; Passage=4
-4.4
-0.3
-0.0
+0.1
-0.5
complex community
Community=arabino-guar; Passage=4
-4.6
-0.4
-0.1
-0.1
+0.2
complex community
Community=arabino-guar; Passage=4
-4.8
+0.1
-0.2
+0.1
-0.2
complex community
Community=guar; Passage=4
-4.4
-0.4
+0.0
+0.2
-0.2
complex community
Community=arabino-guar; Passage=4
-4.6
-0.3
-0.2
+0.2
+0.2
complex community
Community=Kojac gum; Passage=4
-4.3
+0.1
-0.1
+0.2
-0.5
complex community
Community=Locust bean gum; Passage=4
-4.4
-0.0
+0.2
+0.0
-0.4
complex community
Community=Locust bean gum; Passage=4
-4.5
-0.1
-0.2
-0.0
+0.3
complex community
Community=Locust bean gum; Passage=4
-4.2
-0.1
-0.1
+0.4
-0.3
complex community
Community=Locust bean gum; Passage=4
-4.5
-0.1
-0.1
+0.2
+0.5
vitamin
M9 with calcium pantothenate 10 mg/mL
-2.3
+0.1
-0.0
-0.2
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-2.2
+0.1
+0.0
+0.0
-0.5
vitamin
M9 with calcium pantothenate 10 mg/mL
-2.3
+0.1
-0.0
-0.0
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-2.3
-0.2
-0.1
-0.1
+0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-1.6
+0.0
+0.0
-0.2
-0.4
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-1.8
+0.0
-0.0
-0.1
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL
-2.2
+0.1
-0.0
-0.2
+0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-1.7
+0.1
-0.1
-0.1
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-1.6
+0.1
+0.0
-0.1
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-1.7
+0.1
-0.0
-0.1
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-1.6
-0.1
+0.0
-0.2
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL
-1.6
+0.2
-0.0
+0.0
-0.4
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-1.6
+0.1
-0.1
-0.2
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-1.3
+0.1
-0.0
-0.0
-0.4
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-1.7
-0.0
-0.0
-0.2
+0.4
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-1.6
-0.1
-0.0
+0.1
+0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-1.2
-0.1
-0.0
-0.1
+0.2
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