Fitness for 5 genes in Hydrogenophaga sp. GW460-11-11-14-LB1

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500 ntGFF5616 and GFF5617 are separated by 12 nucleotidesGFF5617 and GFF5618 are separated by 127 nucleotidesGFF5618 and GFF5619 are separated by 9 nucleotidesGFF5619 and GFF5620 are separated by 32 nucleotides GFF5616 - Alpha-methylacyl-CoA racemase (EC 5.1.99.4), at 2,633,596 to 2,634,762 GFF5616 GFF5617 - Butyryl-CoA dehydrogenase (EC 1.3.99.2), at 2,634,775 to 2,635,935 GFF5617 GFF5618 - Transcriptional regulator, TetR family, at 2,636,063 to 2,636,653 GFF5618 GFF5619 - Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1), at 2,636,663 to 2,637,838 GFF5619 GFF5620 - Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3), at 2,637,871 to 2,639,997 GFF5620
Group Condition GFF5616 GFF5617 GFF5618 GFF5619 GFF5620
carbon source Ying_AminoAcid20 rep A; time point 1 -0.3 +0.1 -0.2 -0.3 -0.3
carbon source Ying_all64 rep C; time point 1 -0.0 -0.1 -0.1 -0.4 +0.0
carbon source Ying_AminoAcid20 rep B; time point 2 -0.1 +0.1 -0.4 -0.1 -0.2
carbon source Ying_all64 rep A; time point 1 +0.0 -0.2 -0.2 +0.1 -0.0
carbon source Ying_OrganicAcid7 rep C; time point 1 +0.1 -0.1 +0.3 -0.0 -0.6
carbon source Ying_AminoAcid20 rep A; time point 2 -0.1 +0.1 -0.3 -0.2 +0.2
carbon source Ying_all64 rep B; time point 3 -0.2 +0.1 -0.0 +0.2 -0.0
carbon source Ying_all64 rep A; time point 3 -0.2 +0.3 +0.1 -0.1 -0.1
carbon source Ying_sugar7 rep C; time point 1 -0.1 -0.0 -0.2 -0.0 +0.4
carbon source Ying_all64 rep A; time point 2 -0.0 +0.2 -0.3 -0.1 +0.4
carbon source Ying_sugar7 rep C; time point 3 -0.0 +0.1 +0.3 -0.0 -0.3
carbon source Ying_Others16 rep C; time point 2 -0.1 +0.0 -0.3 +0.3 +0.2
carbon source Ying_Nucleobase14 rep A; time point 2 +0.1 -0.2 +0.4 -0.0 -0.1
carbon source Ying_OrganicAcid7 rep B; time point 1 +0.0 +0.1 -0.3 -0.0 +0.3
carbon source Ying_Nucleobase14 rep C; time point 2 +0.2 +0.2 +0.2 -0.2 -0.2
carbon source Ying_Others16 rep B; time point 2 -0.1 +0.2 +0.2 -0.2 +0.2
carbon source Ying_Others16 rep A; time point 1 -0.1 +0.2 -0.1 +0.0 +0.2
carbon source Ying_all64 rep B; time point 2 -0.0 +0.2 +0.2 -0.2 +0.2
carbon source Ying_OrganicAcid7 rep C; time point 2 +0.1 +0.2 -0.3 +0.1 +0.2
carbon source Ying_sugar7 rep A; time point 2 +0.1 +0.2 +0.2 +0.1 -0.2
carbon source Ying_sugar7 rep A; time point 3 -0.0 +0.3 +0.2 +0.1 -0.2
carbon source Ying_Nucleobase14 rep A; time point 1 +0.1 +0.3 +0.2 -0.2 -0.0
carbon source Ying_Nucleobase14 rep B; time point 2 +0.1 +0.2 +0.0 -0.0 +0.3
carbon source Ying_sugar7 rep A; time point 1 -0.1 +0.0 +0.1 +0.1 +0.5
carbon source Ying_all64 rep C; time point 2 +0.3 -0.2 +0.5 +0.1 -0.1
carbon source Ying_AminoAcid20 rep B; time point 1 +0.1 +0.1 +0.3 -0.1 +0.2
carbon source Ying_sugar7 rep B; time point 2 +0.0 +0.1 +0.3 +0.0 +0.2
carbon source Ying_all64 rep C; time point 3 +0.2 -0.1 +0.9 +0.4 -0.6
carbon source Ying_Others16 rep A; time point 3 -0.2 +0.2 +0.9 +0.2 -0.0
carbon source Ying_Nucleobase14 rep C; time point 1 +0.0 +0.1 +0.1 +0.6 +0.7
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