Fitness for 5 genes in Hydrogenophaga sp. GW460-11-11-14-LB1

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500 ntGFF5806 and GFF5602 are separated by 311 nucleotidesGFF5602 and GFF5603 are separated by 13 nucleotidesGFF5603 and GFF5604 are separated by 39 nucleotidesGFF5604 and GFF5605 are separated by 4 nucleotides GFF5806 - tRNA-Ala-CGC, at 2,620,081 to 2,620,153 GFF5806 GFF5602 - Inositol transport system sugar-binding protein, at 2,620,465 to 2,621,376 GFF5602 GFF5603 - 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100), at 2,621,390 to 2,622,166 GFF5603 GFF5604 - Tricarboxylate transport protein TctC, at 2,622,206 to 2,623,183 GFF5604 GFF5605 - TcuR: regulates tcuABC genes used in utilization of tricarballylate, at 2,623,188 to 2,624,126 GFF5605
Group Condition GFF5806 GFF5602 GFF5603 GFF5604 GFF5605
carbon source Ying_sugar7 rep B; time point 1 +0.1 -1.5 N.D. -0.3 -0.0
carbon source Ying_Others16 rep B; time point 2 +0.3 -1.3 N.D. -0.0 -0.4
carbon source Ying_Others16 rep C; time point 3 -0.4 -0.6 N.D. -0.2 -0.3
carbon source Ying_all64 rep A; time point 1 -0.4 -0.7 N.D. +0.0 -0.3
carbon source Ying_all64 rep A; time point 3 +0.4 -0.0 N.D. -0.6 -0.5
carbon source Ying_Nucleobase14 rep A; time point 1 +0.2 -1.2 N.D. +0.2 +0.0
carbon source Ying_OrganicAcid7 rep B; time point 3 +0.1 +0.1 N.D. -0.6 -0.4
carbon source Ying_OrganicAcid7 rep A; time point 1 +0.3 -1.0 N.D. +0.4 -0.3
carbon source Ying_Nucleobase14 rep C; time point 1 +0.3 -0.9 N.D. +0.5 -0.6
carbon source Ying_AminoAcid20 rep C; time point 3 +0.4 -0.4 N.D. -0.1 -0.2
carbon source Ying_sugar7 rep A; time point 3 +0.4 +0.2 N.D. -0.4 -0.3
carbon source Ying_AminoAcid20 rep A; time point 2 +0.2 -0.6 N.D. +0.2 +0.0
carbon source Ying_all64 rep B; time point 1 -0.6 +0.6 N.D. -0.1 -0.1
carbon source Ying_sugar7 rep C; time point 1 +0.4 -0.3 N.D. +0.2 -0.1
carbon source Ying_Others16 rep B; time point 1 +0.3 +0.4 N.D. -0.1 -0.3
carbon source Ying_all64 rep B; time point 2 +0.6 -0.1 N.D. +0.1 -0.3
carbon source Ying_Nucleobase14 rep B; time point 2 +0.2 -0.3 N.D. +0.5 -0.1
carbon source Ying_sugar7 rep C; time point 3 +0.3 +0.5 N.D. -0.2 -0.4
carbon source Ying_sugar7 rep B; time point 3 +0.5 +0.2 N.D. +0.1 -0.4
carbon source Ying_OrganicAcid7 rep C; time point 3 +0.6 +0.1 N.D. +0.0 -0.4
carbon source Ying_AminoAcid20 rep C; time point 1 -0.3 +0.7 N.D. +0.3 -0.3
carbon source Ying_OrganicAcid7 rep B; time point 2 +0.9 -0.4 N.D. +0.0 +0.2
carbon source Ying_AminoAcid20 rep B; time point 1 +0.5 -0.2 N.D. +0.4 +0.1
carbon source Ying_Others16 rep A; time point 3 +0.7 +0.5 N.D. -0.0 -0.5
carbon source Ying_all64 rep C; time point 3 +0.2 +1.1 N.D. -0.1 -0.4
carbon source Ying_sugar7 rep A; time point 2 +0.6 -0.0 N.D. -0.1 +0.4
carbon source Ying_Others16 rep C; time point 1 +0.3 +0.7 N.D. -0.0 -0.1
carbon source Ying_OrganicAcid7 rep B; time point 1 +0.3 +0.5 N.D. +0.2 -0.1
carbon source Ying_Nucleobase14 rep A; time point 2 +0.6 +0.5 N.D. -0.2 -0.0
carbon source Ying_Others16 rep A; time point 1 +0.4 +0.2 N.D. +0.2 +0.3
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