Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF5593 and GFF5594 overlap by 4 nucleotidesGFF5594 and GFF5595 are separated by 31 nucleotidesGFF5595 and GFF5596 are separated by 3 nucleotidesGFF5596 and GFF5597 are separated by 166 nucleotides GFF5593 - no description, at 213,764 to 214,567 GFF5593 GFF5594 - Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1), at 214,564 to 215,640 GFF5594 GFF5595 - no description, at 215,672 to 216,709 GFF5595 GFF5596 - Spermidine/putrescine import ABC transporter permease protein PotB (TC 3.A.1.11.1), at 216,713 to 217,546 GFF5596 GFF5597 - Two-component transcriptional response regulator, LuxR family, at 217,713 to 218,345 GFF5597
Group Condition GFF5593 GFF5594 GFF5595 GFF5596 GFF5597
complex community Community=Locust bean gum; Passage=4 -0.6 +0.1 +0.0 +0.0 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 -0.1 -0.1 -0.2 -0.1
complex community Community=guar; Passage=4 -0.6 +0.1 +0.3 -0.1 -0.2
vitamin M9 with Supernatant from Cyptococcus +0.0 -0.3 -0.3 +0.2 -0.0
vitamin M9 with Supernatant from Cyptococcus -0.1 -0.7 +0.1 -0.0 +0.2
phage phage_bap4 +0.1 -0.2 +0.0 +0.0 -0.3
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.0 -0.2 -0.2 +0.2 -0.1
complex community Community=arabino-guar; Passage=4 -0.0 -0.0 -0.4 -0.0 +0.2
complex community Community=guar; Passage=4 -0.3 -0.4 +0.8 +0.1 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 -0.3 +0.1 +0.1 +0.1
complex community Community=arabino-guar; Passage=4 -0.3 -0.2 +0.3 +0.2 +0.0
complex community Community=guar; Passage=4 -0.4 +0.2 +0.1 -0.1 +0.4
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.0 +0.2 +0.1 +0.1 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.2 -0.3 +0.1 +0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.0 -0.1 +0.1 -0.0 +0.3
phage phage_bap4 +0.3 +0.1 +0.1 +0.1 -0.3
complex community Community=guar; Passage=4 -0.3 +0.1 +0.3 +0.3 -0.0
phage phage_bap4 +0.2 +0.2 +0.3 +0.1 -0.4
complex community Community=Locust bean gum; Passage=4 +0.1 -0.2 +0.2 -0.0 +0.3
phage phage_bap4 +0.3 +0.1 +0.0 +0.2 -0.1
complex community Community=Kojac gum; Passage=4 +0.1 +0.6 -0.0 -0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.3 +0.2 -0.2 +0.1 +0.1
complex community Community=Kojac gum; Passage=1 +0.2 +0.2 +0.2 -0.0 +0.0
complex community Community=arabino-guar; Passage=4 +0.3 -0.2 +0.4 +0.1 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 -0.0 +0.2 +0.2 +0.2
complex community Community=Locust bean gum; Passage=4 +0.3 +0.7 -0.0 -0.2 +0.2
phage phage_bap4 +0.3 +0.4 +0.1 +0.1 +0.1
phage phage_bap4 +0.5 -0.1 +0.3 +0.2 +0.2
complex community Community=Locust bean gum; Passage=4 -0.4 +0.1 +0.8 +0.4 +0.2
phage phage_bap4 +0.3 +0.2 +0.3 +0.2 +0.1
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