Fitness for 5 genes in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

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500 ntGFF556 and GFF557 overlap by 4 nucleotidesGFF557 and GFF558 are separated by 1 nucleotidesGFF558 and GFF559 overlap by 4 nucleotidesGFF559 and GFF560 are separated by 12 nucleotides GFF556 - Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3), at 286,781 to 287,668 GFF556 GFF557 - Glycerol-3-phosphate ABC transporter, permease protein UgpE (TC 3.A.1.1.3), at 287,665 to 288,510 GFF557 GFF558 - Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC (TC 3.A.1.1.3), at 288,512 to 289,582 GFF558 GFF559 - Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46), at 289,579 to 290,319 GFF559 GFF560 - FIG00638953: hypothetical protein, at 290,332 to 290,748 GFF560
Group Condition GFF556 GFF557 GFF558 GFF559 GFF560
nophagecontrol No phage control -0.1 -0.1 +0.1 -1.3 -0.0
phage LB_plus_SM_buffer with 8C2_phage 15 MOI -0.2 -0.1 +0.1 -1.1 +0.0
micoeukaryotes Dictyostellum sp.mixed culture-1 +0.0 +0.2 +0.1 -0.8 +0.0
phage LB_plus_SM_buffer with EIP16_phage 0.875 MOI +0.2 -0.4 -0.1 +0.2 +0.1
phage phi19h1_phage 15 MOI -0.1 -0.5 +0.2 +0.1 +0.2
phage LB_plus_SM_buffer with Ffm_phage 18.75 MOI +0.1 -0.4 +0.0 +0.3 -0.0
phage LB_plus_SM_buffer with FelixO1_phage (wt new) 0.75 MOI -0.3 -0.3 +0.1 +0.3 +0.1
nophagecontrol No phage control +0.2 +0.2 +0.2 -0.5 -0.1
phage LB_plus_SM_buffer with S16_phage 15 MOI -0.0 -0.0 +0.1 -0.5 +0.4
phage LB_plus_SM_buffer with Ffm_phage 0.1875 MOI +0.2 -0.3 +0.1 +0.3 -0.2
phage LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI -0.1 -0.4 -0.0 +0.4 +0.3
phage LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI +0.1 -0.0 +0.4 -0.4 +0.1
phage Ffm_phage 10 MOI; agar plate assay +0.1 +0.0 +0.1 +0.7 -0.7
phage LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI +0.4 +0.2 +0.3 -0.4 -0.1
phage LB_plus_SM_buffer with ES18h1_phage 0.00075 MOI -0.0 -0.1 -0.0 +1.0 -0.4
phage LB_plus_SM_buffer with EIP16_phage 0.0875 MOI +0.2 -0.1 +0.1 +0.4 -0.2
phage LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI +0.1 +0.2 +0.2 -0.2 +0.1
lb_plus_sm_buffer LB_plus_SM_buffer +0.4 -0.1 +0.2 -0.2 +0.1
phage LB_plus_SM_buffer with Br60_phage 0.0000005 MOI -0.0 -0.1 +0.1 +0.8 -0.3
phage LB_plus_SM_buffer with 6F2_phage 0.1875 MOI +0.1 -0.1 +0.2 -0.6 +0.8
phage LB_plus_SM_buffer with 6F2_phage 1.875 MOI +0.1 -0.2 +0.1 +0.6 -0.0
phage LB_plus_SM_buffer with 6F2_phage 0.01875 MOI +0.2 -0.2 +0.2 +0.5 +0.0
lb_plus_sm_buffer LB_plus_SM_buffer +0.1 +0.3 -0.1 +0.5 +0.0
phage LB_plus_SM_buffer with FelixO1_phage (wt new) 0.0075 MOI +0.1 -0.2 +0.2 +0.4 +0.3
phage LB_plus_SM_buffer with 6D2_phage 15 MOI +0.0 -0.0 +0.1 +0.6 +0.1
phage LB_plus_SM_buffer with Br60_phage 0.0005 MOI -0.2 -0.0 +0.0 +0.9 +0.2
phage LB_plus_SM_buffer with EIP16_phage 8.75 MOI +0.1 -0.1 +0.0 +0.7 +0.2
phage 6H2_phage 10 MOI; agar plate assay -0.3 +0.0 +0.2 +0.9 +0.3
phage LB_plus_SM_buffer with 6F2_phage 15 MOI +0.0 +0.4 +0.1 +0.5 +0.1
phage LB_plus_SM_buffer with ES18h1_phage 0.75 MOI -0.6 -0.3 +0.4 +3.7 -0.3
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