Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF5548 and GFF5549 are separated by 301 nucleotidesGFF5549 and GFF5550 are separated by 140 nucleotidesGFF5550 and GFF5551 are separated by 74 nucleotidesGFF5551 and GFF5552 are separated by 2 nucleotides GFF5548 - Urea carboxylase (EC 6.3.4.6) without Allophanate hydrolase 2 domains, at 176,188 to 177,927 GFF5548 GFF5549 - Hydrogen peroxide-inducible genes activator => OxyR, at 178,229 to 179,194 GFF5549 GFF5550 - DNA protection during starvation protein, at 179,335 to 179,910 GFF5550 GFF5551 - 4-hydroxybenzoate polyprenyltransferase (EC 2.5.1.39), at 179,985 to 180,845 GFF5551 GFF5552 - MaoC domain protein dehydratase, at 180,848 to 181,333 GFF5552
Group Condition GFF5548 GFF5549 GFF5550 GFF5551 GFF5552
complex community Community=Locust bean gum; Passage=4 -0.8 -0.9 -0.1 N.D. -0.9
complex community Community=arabino-guar; Passage=4 -0.3 -0.2 +0.2 N.D. -1.2
complex community Community=Kojac gum; Passage=4 -0.6 -0.7 +0.0 N.D. -0.3
complex community Community=Locust bean gum; Passage=4 -0.6 -0.5 -0.1 N.D. -0.2
complex community Community=arabino-guar; Passage=4 -0.4 -0.3 +0.0 N.D. -0.3
complex community Community=guar; Passage=4 -0.5 -0.4 +0.0 N.D. -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 -0.2 -0.0 N.D. -0.3
complex community Community=guar; Passage=4 -0.5 -0.4 +0.1 N.D. +0.3
complex community Community=arabino-guar; Passage=4 -0.3 -0.2 +0.3 N.D. -0.3
phage phage_bap4 +0.2 -0.4 +0.0 N.D. -0.3
complex community Community=arabino-guar; Passage=4 -0.4 -0.0 +0.3 N.D. -0.2
complex community Community=Locust bean gum; Passage=4 -0.7 -0.2 +0.1 N.D. +0.5
complex community Community=guar; Passage=4 -0.5 +0.2 -0.0 N.D. +0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.2 -0.1 +0.1 N.D. +0.2
vitamin M9 with calcium pantothenate 10 mg/mL -0.3 -0.0 -0.1 N.D. +0.3
phage phage_bap4 +0.3 -0.4 +0.0 N.D. +0.1
phage phage_bap4 +0.2 -0.4 +0.1 N.D. +0.1
complex community Community=Locust bean gum; Passage=4 -0.1 -0.2 +0.2 N.D. +0.3
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 -0.1 -0.1 N.D. +0.3
phage phage_bap4 +0.3 -0.3 +0.1 N.D. +0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.3 +0.1 +0.1 N.D. +0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.4 +0.1 +0.2 N.D. +0.3
vitamin M9 with Supernatant from Cyptococcus -0.3 +0.1 +0.2 N.D. +0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.3 +0.2 +0.2 N.D. +0.1
vitamin M9 with Supernatant from Cyptococcus -0.3 +0.2 +0.1 N.D. +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.0 -0.2 +0.2 N.D. +0.5
complex community Community=Kojac gum; Passage=1 +0.1 +0.3 -0.0 N.D. +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.0 +0.1 +0.1 N.D. +0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.0 +0.0 +0.0 N.D. +0.5
complex community Community=guar; Passage=4 -0.4 +0.1 +0.2 N.D. +0.9
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