Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF5543 and GFF5544 are separated by 2 nucleotidesGFF5544 and GFF5545 are separated by 10 nucleotidesGFF5545 and GFF5546 are separated by 45 nucleotidesGFF5546 and GFF5547 overlap by 4 nucleotides GFF5543 - FIG015373: Membrane protein, at 171,381 to 172,118 GFF5543 GFF5544 - FIG001614: Membrane protein, at 172,121 to 173,077 GFF5544 GFF5545 - Pyrrolidone-carboxylate peptidase (EC 3.4.19.3), at 173,088 to 173,771 GFF5545 GFF5546 - Lactam utilization protein LamB, at 173,817 to 174,584 GFF5546 GFF5547 - Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54) / Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54), at 174,581 to 176,173 GFF5547
Group Condition GFF5543 GFF5544 GFF5545 GFF5546 GFF5547
complex community Community=Locust bean gum; Passage=4 -1.0 +0.2 -0.2 -0.7 -0.4
complex community Community=Kojac gum; Passage=4 -0.7 -0.0 +0.2 -0.3 -0.7
complex community Community=guar; Passage=4 -0.3 +0.0 -0.0 -0.2 -0.6
complex community Community=Locust bean gum; Passage=4 -0.0 -0.1 +0.2 -0.8 -0.3
complex community Community=arabino-guar; Passage=4 -0.1 +0.0 -0.7 +0.3 -0.3
complex community Community=Locust bean gum; Passage=4 -0.6 +0.2 -0.1 +0.4 -0.7
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.4 +0.0 +0.3 -0.1 -0.4
complex community Community=guar; Passage=4 -0.2 +0.1 +0.1 -0.8 +0.1
vitamin M9 with Supernatant from Cyptococcus -0.2 -0.0 +0.1 +0.0 -0.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 +0.0 +0.0 +0.1 -0.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 -0.1 +0.2 -0.1 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.4 +0.0 +0.2 -0.0 -0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.4 -0.1 +0.3 +0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 +0.0 +0.2 -0.2 +0.1
complex community Community=arabino-guar; Passage=4 +0.2 +0.2 +0.1 -0.4 -0.2
phage phage_bap4 +0.4 -0.0 -0.1 -0.2 -0.1
complex community Community=guar; Passage=4 +0.2 -0.0 +0.1 +0.6 -0.8
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.3 +0.0 +0.4 -0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.3 -0.1 +0.0 +0.1 -0.3
complex community Community=arabino-guar; Passage=4 -0.0 +0.1 +0.3 +0.1 -0.5
vitamin M9 with Supernatant from Cyptococcus +0.3 +0.0 +0.1 +0.3 -0.5
vitamin M9 with Supernatant from Cyptococcus +0.3 +0.0 +0.1 +0.0 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.3 +0.1 +0.2 -0.1 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.5 -0.0 -0.1 -0.1 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.3 +0.1 +0.1 +0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.3 -0.0 +0.2 +0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.5 -0.1 +0.1 -0.0 -0.0
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.2 +0.0 +0.2 +0.3 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.6 -0.0 +0.1 -0.0 -0.0
complex community Community=Locust bean gum; Passage=4 +0.9 +0.2 -0.1 +0.2 -0.6
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