Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF5538 and GFF5539 are separated by 6 nucleotidesGFF5539 and GFF5540 are separated by 114 nucleotidesGFF5540 and GFF5541 are separated by 15 nucleotidesGFF5541 and GFF5542 overlap by 4 nucleotides GFF5538 - ATP-dependent DNA helicase RecG (EC 3.6.4.12), at 167,063 to 169,195 GFF5538 GFF5539 - Transporter, LysE family, at 169,202 to 169,834 GFF5539 GFF5540 - FIG01201438: hypothetical protein, at 169,949 to 170,389 GFF5540 GFF5541 - Transcriptional regulator, GntR family, at 170,405 to 171,109 GFF5541 GFF5542 - no description, at 171,106 to 171,207 GFF5542
Group Condition GFF5538 GFF5539 GFF5540 GFF5541 GFF5542
complex community Community=guar; Passage=4 -1.7 -0.1 -0.3 -0.3 -0.7
complex community Community=arabino-guar; Passage=4 -1.7 -0.2 +0.5 -1.7 +0.1
complex community Community=arabino-guar; Passage=4 -1.8 -0.2 -0.1 -1.2 +0.3
complex community Community=arabino-guar; Passage=4 -1.6 +0.1 -0.3 -1.1 -0.1
complex community Community=guar; Passage=4 -1.0 -0.3 +0.0 -0.6 -0.6
complex community Community=Kojac gum; Passage=4 -0.8 -0.1 -0.8 -1.4 +0.7
complex community Community=guar; Passage=4 -1.3 +0.1 +0.5 -0.7 -0.3
complex community Community=arabino-guar; Passage=4 -1.3 -0.1 +0.0 -0.4 +0.2
complex community Community=Locust bean gum; Passage=4 -0.7 -0.2 -0.3 +0.3 -0.5
complex community Community=guar; Passage=4 -0.4 -0.2 +0.5 -1.5 +0.5
complex community Community=Locust bean gum; Passage=4 -0.7 -0.3 +0.4 -0.5 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL -0.3 -0.1 -0.3 -0.0 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL -0.5 -0.1 -0.1 -0.2 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.4 +0.0 -0.3 -0.2 -0.1
complex community Community=Locust bean gum; Passage=4 -1.6 +0.0 +0.5 +0.5 -0.2
complex community Community=Locust bean gum; Passage=4 -0.8 -0.1 +0.0 -0.1 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.4 +0.1 -0.2 -0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.4 +0.1 +0.2 -0.5 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.3 -0.0 +0.0 -0.4 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.5 -0.1 -0.1 +0.3 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.4 +0.3 -0.2 -0.1 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL -0.3 +0.1 -0.4 +0.1 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.5 +0.1 -0.2 +0.3 +0.0
phage phage_bap4 -0.3 -0.2 +0.2 +0.2 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.3 -0.0 -0.3 +0.4 +0.0
vitamin M9 with Supernatant from Cyptococcus -0.2 -0.2 -0.1 +0.3 +0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.4 +0.0 -0.2 +0.2 +0.3
vitamin M9 with Supernatant from Cyptococcus -0.1 +0.2 -0.2 +0.2 -0.3
phage phage_bap4 -0.2 +0.1 +0.3 +0.2 -0.3
vitamin M9 with Supernatant from Cyptococcus -0.2 -0.2 -0.0 +0.5 +0.2
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