Fitness for 5 genes in Hydrogenophaga sp. GW460-11-11-14-LB1

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500 ntGFF5517 and GFF5518 are separated by 79 nucleotidesGFF5518 and GFF5519 are separated by 11 nucleotidesGFF5519 and GFF5520 are separated by 334 nucleotidesGFF5520 and GFF5521 are separated by 62 nucleotides GFF5517 - 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC), at 2,519,410 to 2,521,200 GFF5517 GFF5518 - Electron transfer flavoprotein, alpha subunit, at 2,521,280 to 2,522,212 GFF5518 GFF5519 - Electron transfer flavoprotein, beta subunit, at 2,522,224 to 2,522,973 GFF5519 GFF5520 - DNA-binding response regulator, at 2,523,308 to 2,524,018 GFF5520 GFF5521 - peptidoglycan binding domain protein, at 2,524,081 to 2,525,724 GFF5521
Group Condition GFF5517 GFF5518 GFF5519 GFF5520 GFF5521
carbon source Ying_Nucleobase14 rep C; time point 1 -0.0 N.D. N.D. +0.1 -2.1
carbon source Ying_all64 rep C; time point 2 +0.2 N.D. N.D. +0.0 -1.4
carbon source Ying_Nucleobase14 rep B; time point 2 +0.0 N.D. N.D. +0.2 -1.0
carbon source Ying_AminoAcid20 rep A; time point 1 -0.1 N.D. N.D. -0.2 -0.3
carbon source Ying_Nucleobase14 rep A; time point 2 -0.1 N.D. N.D. +0.1 -0.6
carbon source Ying_sugar7 rep B; time point 2 +0.1 N.D. N.D. -0.0 -0.6
carbon source Ying_all64 rep B; time point 3 -0.1 N.D. N.D. -0.0 -0.4
carbon source Ying_AminoAcid20 rep C; time point 2 -0.1 N.D. N.D. -0.1 -0.2
carbon source Ying_Others16 rep B; time point 1 -0.0 N.D. N.D. -0.1 -0.3
carbon source Ying_sugar7 rep A; time point 2 +0.0 N.D. N.D. -0.2 -0.2
carbon source Ying_OrganicAcid7 rep A; time point 3 -0.1 N.D. N.D. +0.2 +0.1
carbon source Ying_AminoAcid20 rep A; time point 2 -0.2 N.D. N.D. -0.1 +0.5
carbon source Ying_Others16 rep A; time point 2 -0.0 N.D. N.D. -0.0 +0.3
carbon source Ying_sugar7 rep C; time point 2 +0.1 N.D. N.D. -0.1 +0.3
carbon source Ying_AminoAcid20 rep A; time point 3 -0.2 N.D. N.D. +0.1 +0.4
carbon source Ying_sugar7 rep A; time point 1 +0.1 N.D. N.D. +0.4 -0.1
carbon source Ying_Nucleobase14 rep A; time point 1 -0.2 N.D. N.D. +0.1 +0.5
carbon source Ying_Others16 rep A; time point 1 +0.1 N.D. N.D. -0.1 +0.4
carbon source Ying_OrganicAcid7 rep B; time point 3 +0.0 N.D. N.D. +0.1 +0.3
carbon source Ying_Others16 rep A; time point 3 +0.1 N.D. N.D. +0.1 +0.3
carbon source Ying_all64 rep A; time point 3 -0.2 N.D. N.D. +0.0 +0.6
carbon source Ying_sugar7 rep A; time point 3 -0.0 N.D. N.D. +0.1 +0.5
carbon source Ying_all64 rep A; time point 2 -0.0 N.D. N.D. +0.0 +0.5
carbon source Ying_all64 rep C; time point 3 +0.1 N.D. N.D. +0.1 +0.3
carbon source Ying_Nucleobase14 rep B; time point 1 -0.0 N.D. N.D. +0.3 +0.3
carbon source Ying_Others16 rep B; time point 2 +0.1 N.D. N.D. -0.1 +0.7
carbon source Ying_OrganicAcid7 rep C; time point 1 +0.0 N.D. N.D. +0.0 +0.6
carbon source Ying_OrganicAcid7 rep A; time point 1 -0.0 N.D. N.D. +0.3 +0.5
carbon source Ying_Others16 rep B; time point 3 +0.1 N.D. N.D. +0.1 +0.7
carbon source Ying_sugar7 rep B; time point 1 +0.0 N.D. N.D. +0.4 +0.4
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