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Cofit
Protein
Homologs
Fitness for 5 genes in
Hydrogenophaga sp. GW460-11-11-14-LB1
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF5515 and GFF5516 are separated by 5 nucleotides
GFF5516 and GFF5517 are separated by 88 nucleotides
GFF5517 and GFF5518 are separated by 79 nucleotides
GFF5518 and GFF5519 are separated by 11 nucleotides
GFF5515 - TesB-like acyl-CoA thioesterase 5, at 2,517,553 to 2,518,335
GFF5515
GFF5516 - Dioxygenases related to 2-nitropropane dioxygenase, at 2,518,341 to 2,519,321
GFF5516
GFF5517 - 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC), at 2,519,410 to 2,521,200
GFF5517
GFF5518 - Electron transfer flavoprotein, alpha subunit, at 2,521,280 to 2,522,212
GFF5518
GFF5519 - Electron transfer flavoprotein, beta subunit, at 2,522,224 to 2,522,973
GFF5519
Group
Condition
GFF5515
GFF5516
GFF5517
GFF5518
GFF5519
carbon source
Ying_OrganicAcid7 rep A; time point 3
-0.4
-0.1
-0.1
N.D.
N.D.
carbon source
Ying_sugar7 rep C; time point 3
-0.3
-0.1
-0.0
N.D.
N.D.
carbon source
Ying_all64 rep C; time point 3
-0.4
-0.2
+0.1
N.D.
N.D.
carbon source
Ying_Others16 rep C; time point 3
-0.3
-0.0
-0.0
N.D.
N.D.
carbon source
Ying_OrganicAcid7 rep B; time point 1
-0.2
-0.1
-0.1
N.D.
N.D.
carbon source
Ying_OrganicAcid7 rep A; time point 1
-0.1
-0.3
-0.0
N.D.
N.D.
carbon source
Ying_all64 rep A; time point 3
-0.2
-0.1
-0.2
N.D.
N.D.
carbon source
Ying_AminoAcid20 rep A; time point 2
-0.1
-0.1
-0.2
N.D.
N.D.
carbon source
Ying_AminoAcid20 rep C; time point 2
-0.1
-0.1
-0.1
N.D.
N.D.
carbon source
Ying_Others16 rep B; time point 1
-0.3
-0.0
-0.0
N.D.
N.D.
carbon source
Ying_sugar7 rep C; time point 1
-0.4
+0.0
+0.1
N.D.
N.D.
carbon source
Ying_OrganicAcid7 rep B; time point 3
-0.2
-0.1
+0.0
N.D.
N.D.
carbon source
Ying_sugar7 rep A; time point 3
-0.1
-0.1
-0.0
N.D.
N.D.
carbon source
Ying_AminoAcid20 rep B; time point 3
-0.1
-0.2
-0.0
N.D.
N.D.
carbon source
Ying_Others16 rep A; time point 3
-0.1
-0.2
+0.1
N.D.
N.D.
carbon source
Ying_sugar7 rep B; time point 3
-0.2
-0.0
-0.0
N.D.
N.D.
carbon source
Ying_all64 rep C; time point 2
-0.2
-0.2
+0.2
N.D.
N.D.
carbon source
Ying_sugar7 rep C; time point 2
-0.1
-0.1
+0.1
N.D.
N.D.
carbon source
Ying_sugar7 rep A; time point 1
-0.0
-0.2
+0.1
N.D.
N.D.
carbon source
Ying_AminoAcid20 rep A; time point 3
+0.0
+0.0
-0.2
N.D.
N.D.
carbon source
Ying_Nucleobase14 rep A; time point 2
+0.1
-0.1
-0.1
N.D.
N.D.
carbon source
Ying_Others16 rep C; time point 1
-0.2
+0.0
+0.1
N.D.
N.D.
carbon source
Ying_Others16 rep A; time point 1
-0.1
-0.1
+0.1
N.D.
N.D.
carbon source
Ying_OrganicAcid7 rep A; time point 2
+0.2
-0.1
+0.0
N.D.
N.D.
carbon source
Ying_Others16 rep B; time point 3
-0.1
+0.1
+0.1
N.D.
N.D.
carbon source
Ying_Nucleobase14 rep A; time point 1
+0.2
+0.1
-0.2
N.D.
N.D.
carbon source
Ying_sugar7 rep B; time point 2
-0.1
+0.1
+0.1
N.D.
N.D.
carbon source
Ying_Nucleobase14 rep B; time point 1
+0.1
+0.1
-0.0
N.D.
N.D.
carbon source
Ying_all64 rep B; time point 3
+0.3
+0.0
-0.1
N.D.
N.D.
carbon source
Ying_all64 rep B; time point 1
+0.2
+0.1
+0.0
N.D.
N.D.
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