Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF5502 and GFF5503 are separated by 55 nucleotidesGFF5503 and GFF5504 are separated by 87 nucleotidesGFF5504 and GFF5505 are separated by 7 nucleotidesGFF5505 and GFF5506 are separated by 136 nucleotides GFF5502 - Transcriptional regulator, LysR family, at 132,767 to 133,672 GFF5502 GFF5503 - Phosphoglycerate kinase (EC 2.7.2.3), at 133,728 to 134,957 GFF5503 GFF5504 - Pyruvate kinase (EC 2.7.1.40), at 135,045 to 136,493 GFF5504 GFF5505 - 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7), at 136,501 to 137,517 GFF5505 GFF5506 - Transcriptional regulator Bmul_5214, AsnC family, at 137,654 to 138,139 GFF5506
Group Condition GFF5502 GFF5503 GFF5504 GFF5505 GFF5506
complex community Community=Locust bean gum; Passage=4 -0.3 N.D. -0.1 -0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus -0.1 N.D. -0.0 -0.1 -0.2
complex community Community=arabino-guar; Passage=4 -0.1 N.D. -0.0 -0.2 -0.1
phage phage_bap4 -0.1 N.D. -0.0 -0.1 -0.1
complex community Community=guar; Passage=4 +0.2 N.D. -0.2 -0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 N.D. -0.0 -0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.0 N.D. -0.1 -0.0 -0.1
phage phage_bap4 -0.1 N.D. -0.1 +0.0 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 N.D. +0.0 -0.2 +0.0
complex community Community=Locust bean gum; Passage=4 +0.2 N.D. +0.1 +0.1 -0.5
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.1 N.D. -0.1 -0.1 -0.0
complex community Community=arabino-guar; Passage=4 +0.1 N.D. +0.4 +0.0 -0.6
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 N.D. +0.2 -0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 N.D. +0.1 -0.0 -0.2
complex community Community=guar; Passage=4 +0.1 N.D. -0.1 +0.3 -0.2
complex community Community=guar; Passage=4 +0.1 N.D. -0.2 +0.1 +0.1
complex community Community=Locust bean gum; Passage=4 +0.1 N.D. +0.1 -0.1 -0.1
complex community Community=guar; Passage=4 -0.2 N.D. +0.1 +0.1 +0.0
complex community Community=arabino-guar; Passage=4 -0.0 N.D. +0.1 +0.3 -0.3
phage phage_bap4 +0.1 N.D. -0.0 +0.1 -0.1
complex community Community=Kojac gum; Passage=4 +0.2 N.D. +0.2 -0.2 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 N.D. +0.1 -0.0 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 N.D. +0.2 +0.1 -0.0
phage phage_bap4 +0.1 N.D. -0.0 +0.1 +0.1
complex community Community=arabino-guar; Passage=4 -0.1 N.D. -0.1 +0.1 +0.4
vitamin M9 with Supernatant from Cyptococcus +0.0 N.D. +0.1 +0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.0 N.D. +0.2 +0.0 +0.1
no phage control no phage control +0.1 N.D. -0.0 +0.1 +0.2
no phage control no phage control -0.0 N.D. +0.0 +0.1 +0.3
complex community Community=Locust bean gum; Passage=4 +0.1 N.D. +0.2 +0.2 +0.1
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