Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_28155	PS417_28160	PS417_28165	PS417_28170	PS417_28175
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.0	-0.0	-0.3	-0.7	-0.5
phage	JP1 MOI 10	-0.1	-0.1	-0.2	-0.6	-0.5
phage	JP1 MOI 0.1	-0.3	-0.2	-0.2	-0.2	-0.4
phage	JP1 MOI 1	-0.0	+0.1	-0.6	-0.1	-0.5
phage	P. simiae ORA MOI 10	+0.1	+0.1	-0.2	-0.6	-0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.0	+0.1	+0.3	-1.1	-0.3
phage	P. simiae OR Antrim MOI 1	+0.1	+0.2	-0.1	-0.9	-0.2
rhizosphere	rhizosphere sample 1; outgrowth in LB	+0.1	-0.0	-0.6	-0.6	+0.3
supernatant control	Vogels_fungal_media 0.1X	-0.2	+0.1	-0.2	-0.6	+0.2
phage	P. simiae Grant Run MOI 10	+0.3	+0.2	+0.1	-0.5	-0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.0	+0.2	+0.1	-1.1	+0.1
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.1	+0.1	+0.1	-0.4	-0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.0	+0.0	+0.2	-1.2	+0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.4	+0.2	-0.5	-1.1	+0.4
phage	P. simiae Grant Run MOI 10	-0.2	-0.0	+0.1	+0.3	-0.8
carbon source	Carbon source D-Mannitol 5 mM	+0.1	+0.1	+0.1	-1.0	+0.2
carbon source	Carbon source D-Mannitol 10 mM	+0.2	+0.0	-0.1	-0.9	+0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.3	+0.1	-0.2	-0.8	+0.2
agar plate interaction control	Taped volatile agar plate with no fungus	+0.2	+0.1	+0.1	-1.0	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.1	+0.1	+0.2	-0.8	+0.3
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.1	-0.1	-0.4	+0.5	-0.4
no phage control	Time6-nophage	+0.1	+0.1	-0.2	+0.4	-0.6
phage	Wcs_0.1	+0.1	+0.1	+0.1	-0.6	+0.4
root	root sample 6; outgrowth in LB	+0.8	-0.1	-0.2	-1.3	+1.0
seeds	Growth on radish seeds for 72 hours	+0.3	+0.1	-0.2	-0.9	+0.9
supernatant	Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x	-0.1	+0.1	-0.2	+0.8	-0.3
stress	Doxycycline hyclate 0.001 mg/ml	+0.1	+0.2	+0.2	+0.5	-0.5
supernatant control	Vogels_fungal_media 0.1X	+0.2	+0.1	+0.3	-0.5	+0.4
phage	P. simiae ORA MOI 0.1	+0.5	+0.1	+0.2	+0.5	-0.3
phage	P. simiae ORA MOI 1	-0.1	+0.1	+0.3	+0.8	-0.2