Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF548 and GFF549 are separated by 15 nucleotidesGFF549 and GFF550 are separated by 17 nucleotidesGFF550 and GFF551 are separated by 189 nucleotidesGFF551 and GFF552 are separated by 86 nucleotides GFF548 - Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2), at 590,130 to 591,110 GFF548 GFF549 - DNA-3-methyladenine glycosylase II (EC 3.2.2.21), at 591,126 to 591,776 GFF549 GFF550 - Cysteinyl-tRNA synthetase (EC 6.1.1.16), at 591,794 to 593,170 GFF550 GFF551 - Uncharacterized protein Tbd_1903, at 593,360 to 593,947 GFF551 GFF552 - Peptidyl-prolyl cis-trans isomerase PpiA precursor (EC 5.2.1.8), at 594,034 to 594,627 GFF552
Group Condition GFF548 GFF549 GFF550 GFF551 GFF552
phage phage_bap4 N.D. -1.0 N.D. -0.7 +0.1
phage phage_bap4 N.D. -0.8 N.D. -0.8 +0.1
phage phage_bap4 N.D. -0.6 N.D. -0.9 -0.0
phage phage_bap4 N.D. -0.5 N.D. -0.9 +0.1
phage phage_bap4 N.D. -0.7 N.D. -0.4 -0.2
complex community Community=Locust bean gum; Passage=4 N.D. -0.3 N.D. -0.7 -0.2
phage phage_bap4 N.D. -0.6 N.D. -0.5 +0.0
phage phage_bap4 N.D. -0.4 N.D. -0.5 -0.0
phage phage_bap4 N.D. -0.1 N.D. -0.6 -0.2
complex community Community=Locust bean gum; Passage=4 N.D. -0.2 N.D. -0.1 -0.4
no phage control no phage control N.D. -0.7 N.D. -0.0 +0.1
complex community Community=Kojac gum; Passage=4 N.D. +0.1 N.D. -0.8 +0.1
complex community Community=arabino-guar; Passage=4 N.D. +0.1 N.D. -0.4 -0.3
no phage control no phage control N.D. -0.5 N.D. +0.1 +0.0
no phage control no phage control N.D. -0.5 N.D. +0.0 +0.1
phage phage_bap4 N.D. -0.5 N.D. +0.1 +0.0
complex community Community=arabino-guar; Passage=4 N.D. +0.3 N.D. -0.6 -0.1
phage phage_bap4 N.D. -0.6 N.D. +0.0 +0.2
no phage control no phage control N.D. -0.4 N.D. +0.2 +0.1
complex community Community=arabino-guar; Passage=4 N.D. -0.2 N.D. -0.3 +0.3
complex community Community=guar; Passage=4 N.D. +0.4 N.D. -0.6 +0.3
complex community Community=guar; Passage=4 N.D. +0.6 N.D. -0.5 -0.1
complex community Community=guar; Passage=4 N.D. +0.6 N.D. -0.6 +0.1
complex community Community=Locust bean gum; Passage=4 N.D. +0.7 N.D. -0.5 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. +0.6 N.D. +0.1 -0.2
complex community Community=guar; Passage=4 N.D. +0.9 N.D. -0.5 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. +0.6 N.D. +0.0 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL N.D. +0.5 N.D. +0.1 +0.1
complex community Community=arabino-guar; Passage=4 N.D. +1.0 N.D. -0.3 +0.1
complex community Community=Locust bean gum; Passage=4 N.D. +1.2 N.D. -0.4 +0.1
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