Fitness for 5 genes in Pseudomonas simiae WCS417

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500 ntPS417_28030 and PS417_28035 are separated by 155 nucleotidesPS417_28035 and PS417_28040 are separated by 45 nucleotidesPS417_28040 and PS417_28050 are separated by 270 nucleotidesPS417_28050 and PS417_28055 are separated by 3 nucleotides PS417_28030: PS417_28030 - hypothetical protein, at 6,049,455 to 6,049,832 _28030 PS417_28035: PS417_28035 - transcriptional regulator PhoB, at 6,049,988 to 6,050,677 _28035 PS417_28040: PS417_28040 - histidine kinase, at 6,050,723 to 6,052,045 _28040 PS417_28050: PS417_28050 - hypothetical protein, at 6,052,316 to 6,053,656 _28050 PS417_28055: PS417_28055 - peptidase, at 6,053,660 to 6,054,322 _28055
Group Condition PS417_28030 PS417_28035 PS417_28040 PS417_28050 PS417_28055
seeds Growth on radish seeds for 72 hours -0.8 -2.9 -3.2 -2.5 -0.4
seeds Growth on radish seeds for 72 hours -1.8 -3.3 -2.4 -0.6 -0.1
seeds Growth on radish seeds for 72 hours -1.1 -2.0 -2.9 -0.1 -0.0
solid stress Scopoletin 1 mM; solid stress +0.5 -0.1 -0.4 -5.7 -0.2
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x +0.0 -2.1 -1.9 -1.0 -0.4
solid stress Scopoletin 1 mM; solid stress +0.1 -0.1 -0.5 -4.7 +0.1
solid stress 80% Methanol 0.5 mM; solid stress -0.1 -0.2 -0.1 -4.6 -0.1
solid stress Fraxetin 0.5 mM; solid stress -0.1 -0.3 -0.4 -4.2 -0.0
seeds Growth on radish seeds for 24 hours +0.1 -1.6 -2.2 -1.0 -0.1
liquid stress Scopoletin 3 mM; liquid stress +0.3 -0.5 +0.7 -5.0 +0.0
solid stress Fraxetin 0.5 mM; solid stress -0.0 -0.2 -0.7 -3.6 +0.1
solid stress Fraxetin 0.5 mM; solid stress +0.4 -0.2 +0.0 -4.7 +0.1
solid stress Scopoletin 1 mM; solid stress +0.4 -0.2 -0.2 -4.1 +0.0
solid stress 80% Methanol 1 mM; solid stress +0.2 -0.5 -0.2 -3.9 +0.2
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.0 +0.4 +0.3 -4.6 -0.1
solid stress Fraxetin 1 mM; solid stress -0.1 -0.3 +0.5 -3.9 -0.1
liquid stress Fraxetin 2 mM; liquid stress -0.3 +0.2 +0.4 -4.3 +0.1
solid stress Scopoletin 1 mM; solid stress +0.4 -0.4 -0.2 -3.6 -0.1
solid stress Scopoletin 2 mM; solid stress +0.4 -0.2 -0.1 -3.9 +0.2
liquid stress Fraxetin 3 mM; liquid stress +0.3 +0.2 +0.5 -4.5 -0.0
solid stress Fraxetin 2 mM; solid stress +0.2 +0.5 +0.4 -4.1 -0.0
solid stress Fraxetin 2 mM; solid stress +0.3 +0.5 +0.4 -4.1 +0.2
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.7 +0.2 +0.4 -3.5 -0.2
solid stress Fraxetin 3 mM; solid stress +0.3 +0.7 +0.6 -3.9 +0.2
solid stress Fraxetin 3 mM; solid stress +0.2 +0.8 +1.1 -3.1 -0.1
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.7 +0.6 +0.5 -2.8 +0.3
solid stress Fraxetin 3 mM; solid stress +0.6 +0.8 +1.1 -3.2 +0.0
solid stress Fraxetin 3 mM; solid stress +0.1 +1.0 +0.9 -2.7 +0.0
carbon source L-Valine (C) -0.8 -1.0 -0.4 +3.2 -0.3
stress Cobalt chloride 0.16 mM -0.3 -0.3 -0.5 +3.7 -0.1
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