Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF5455 and GFF5456 are separated by 73 nucleotidesGFF5456 and GFF5457 are separated by 178 nucleotidesGFF5457 and GFF5458 are separated by 28 nucleotidesGFF5458 and GFF5459 are separated by 5 nucleotides GFF5455 - Pyruvate dehydrogenase E1 component (EC 1.2.4.1), at 84,207 to 86,867 GFF5455 GFF5456 - L-threonate/D-erythronate transcriptional regulator, GntR family, at 86,941 to 87,717 GFF5456 GFF5457 - L-threonate dehydrogenase (NAD+), at 87,896 to 88,768 GFF5457 GFF5458 - D-erythronate dehydrogenase (NAD+), at 88,797 to 89,813 GFF5458 GFF5459 - 3-oxo-tetronate kinase, at 89,819 to 91,090 GFF5459
Group Condition GFF5455 GFF5456 GFF5457 GFF5458 GFF5459
complex community Community=guar; Passage=4 -0.0 -0.0 +0.2 -2.3 +0.2
complex community Community=Locust bean gum; Passage=4 +0.1 -0.2 +0.3 -1.6 -0.1
complex community Community=Locust bean gum; Passage=4 +0.2 -0.0 -0.3 -1.3 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.0 +0.0 -0.4 -0.8 +0.2
phage phage_bap4 -0.0 -0.1 -0.1 -0.7 -0.0
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.0 -0.3 -0.0 -0.5 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.0 -0.2 -0.1 -0.3 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.0 -0.2 +0.1 -0.6 +0.0
phage phage_bap4 +0.0 +0.1 +0.1 -0.8 -0.1
complex community Community=Kojac gum; Passage=1 -0.1 +0.0 +0.2 -0.8 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.0 -0.2 -0.2 -0.5 +0.2
phage phage_bap4 -0.0 +0.0 -0.1 -0.5 +0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.0 +0.2 -0.1 -0.2 -0.2
complex community Community=guar; Passage=4 +0.0 +0.1 -0.4 +0.5 -0.5
complex community Community=Locust bean gum; Passage=4 +0.1 -0.2 +0.3 +0.2 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 -0.1 -0.2 +0.5 +0.0
complex community Community=arabino-guar; Passage=4 +0.0 +0.2 +0.0 +0.8 -0.7
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.0 -0.1 -0.4 +0.8 +0.1
phage phage_bap4 -0.1 -0.0 -0.0 +0.5 +0.1
complex community Community=guar; Passage=4 -0.0 -0.5 +0.0 +1.0 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.0 +0.1 +0.0 +0.5 -0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 -0.0 -0.2 +0.6 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.0 -0.0 -0.1 +0.5 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 +0.1 +0.1 +0.3 +0.2
complex community Community=Locust bean gum; Passage=4 +0.3 +0.4 -0.3 +0.2 +0.2
vitamin M9 with Supernatant from Cyptococcus +0.0 -0.1 +0.1 +0.8 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.0 -0.0 -0.1 +0.7 +0.2
complex community Community=arabino-guar; Passage=4 +0.2 +0.2 +0.2 +0.1 +0.3
complex community Community=arabino-guar; Passage=4 +0.2 +0.2 +0.3 +0.4 +0.0
complex community Community=arabino-guar; Passage=4 +0.3 +0.4 +0.0 +0.7 +0.0
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