Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF5447 and GFF5448 are separated by 7 nucleotidesGFF5448 and GFF5449 are separated by 128 nucleotidesGFF5449 and GFF5450 are separated by 196 nucleotidesGFF5450 and GFF5451 are separated by 31 nucleotides GFF5447 - Two-component transcriptional response regulator, LuxR family, at 77,920 to 78,546 GFF5447 GFF5448 - Outer membrane lipoprotein omp16 precursor, at 78,554 to 79,120 GFF5448 GFF5449 - Probable lipoprotein YiaD, at 79,249 to 79,905 GFF5449 GFF5450 - hypothetical protein, at 80,102 to 80,242 GFF5450 GFF5451 - Membrane-bound lytic murein transglycosylase A, at 80,274 to 81,392 GFF5451
Group Condition GFF5447 GFF5448 GFF5449 GFF5450 GFF5451
complex community Community=Locust bean gum; Passage=4 N.D. N.D. -0.7 N.D. -1.4
complex community Community=Kojac gum; Passage=4 N.D. N.D. -0.6 N.D. -1.3
complex community Community=Locust bean gum; Passage=4 N.D. N.D. -0.5 N.D. -1.2
complex community Community=guar; Passage=4 N.D. N.D. -0.7 N.D. -1.0
complex community Community=Locust bean gum; Passage=4 N.D. N.D. -0.5 N.D. -1.2
complex community Community=arabino-guar; Passage=4 N.D. N.D. -0.2 N.D. -1.2
complex community Community=guar; Passage=4 N.D. N.D. -0.4 N.D. -0.4
complex community Community=Locust bean gum; Passage=4 N.D. N.D. -0.0 N.D. -0.9
vitamin M9 with Supernatant from Cyptococcus N.D. N.D. -0.3 N.D. -0.3
complex community Community=arabino-guar; Passage=4 N.D. N.D. -0.2 N.D. -0.4
vitamin M9 with Supernatant from Cyptococcus N.D. N.D. -0.1 N.D. -0.4
vitamin M9 with Supernatant from Cyptococcus N.D. N.D. -0.1 N.D. -0.4
vitamin M9 with Supernatant from Cyptococcus N.D. N.D. -0.1 N.D. -0.3
complex community Community=guar; Passage=4 N.D. N.D. -0.1 N.D. -0.4
complex community Community=arabino-guar; Passage=4 N.D. N.D. -0.2 N.D. -0.2
phage phage_bap4 N.D. N.D. -0.1 N.D. -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. N.D. -0.1 N.D. -0.3
complex community Community=guar; Passage=4 N.D. N.D. +0.2 N.D. -0.6
vitamin M9 with calcium pantothenate 10 mg/mL N.D. N.D. -0.2 N.D. -0.2
phage phage_bap4 N.D. N.D. +0.0 N.D. -0.4
vitamin M9 with Supernatant from Cyptococcus N.D. N.D. -0.0 N.D. -0.3
phage phage_bap4 N.D. N.D. +0.1 N.D. -0.4
phage phage_bap4 N.D. N.D. +0.0 N.D. -0.4
complex community Community=arabino-guar; Passage=4 N.D. N.D. +0.4 N.D. -0.7
phage phage_bap4 N.D. N.D. -0.1 N.D. -0.2
phage phage_bap4 N.D. N.D. +0.0 N.D. -0.3
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. N.D. +0.2 N.D. -0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. N.D. +0.2 N.D. -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. N.D. +0.3 N.D. -0.1
no phage control no phage control N.D. N.D. +0.3 N.D. -0.1
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