Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF5444 and GFF5445 overlap by 4 nucleotidesGFF5445 and GFF5446 are separated by 2 nucleotidesGFF5446 and GFF5447 are separated by 41 nucleotidesGFF5447 and GFF5448 are separated by 7 nucleotides GFF5444 - FIG005080: Possible exported protein, at 70,792 to 75,009 GFF5444 GFF5445 - FIG003879: Uncharacterized subgroup of the nitrilase superfamily, at 75,006 to 75,821 GFF5445 GFF5446 - Two-component system sensor histidine kinase/response regulator hybrid, at 75,824 to 77,878 GFF5446 GFF5447 - Two-component transcriptional response regulator, LuxR family, at 77,920 to 78,546 GFF5447 GFF5448 - Outer membrane lipoprotein omp16 precursor, at 78,554 to 79,120 GFF5448
Group Condition GFF5444 GFF5445 GFF5446 GFF5447 GFF5448
complex community Community=Locust bean gum; Passage=4 -0.3 -1.1 -0.4 N.D. N.D.
complex community Community=guar; Passage=4 -0.8 -0.2 -0.3 N.D. N.D.
complex community Community=arabino-guar; Passage=4 -0.8 -0.3 -0.3 N.D. N.D.
complex community Community=Locust bean gum; Passage=4 -0.5 -0.3 -0.3 N.D. N.D.
complex community Community=arabino-guar; Passage=4 -0.1 -0.4 -0.3 N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 -0.4 -0.2 N.D. N.D.
complex community Community=guar; Passage=4 +0.0 -0.4 -0.4 N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus -0.2 -0.1 -0.5 N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus -0.2 -0.2 -0.3 N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.2 -0.3 -0.2 N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus -0.3 -0.2 -0.2 N.D. N.D.
complex community Community=guar; Passage=4 -0.3 -0.1 -0.3 N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 -0.5 +0.0 N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 -0.5 -0.1 N.D. N.D.
complex community Community=arabino-guar; Passage=4 -0.2 -0.3 -0.2 N.D. N.D.
complex community Community=arabino-guar; Passage=4 -0.3 +0.1 -0.4 N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.2 -0.2 -0.2 N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 -0.1 -0.2 N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.3 -0.1 -0.1 N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.3 -0.2 -0.1 N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.1 -0.2 -0.2 N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 -0.1 -0.2 N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus -0.3 +0.0 -0.1 N.D. N.D.
phage phage_bap4 -0.1 -0.2 -0.1 N.D. N.D.
complex community Community=Kojac gum; Passage=4 -0.1 +0.0 -0.4 N.D. N.D.
complex community Community=Locust bean gum; Passage=4 -0.4 -0.2 +0.2 N.D. N.D.
phage phage_bap4 -0.2 -0.2 +0.1 N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 +0.1 -0.1 N.D. N.D.
phage phage_bap4 -0.2 +0.2 +0.1 N.D. N.D.
phage phage_bap4 -0.2 +0.2 +0.0 N.D. N.D.
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