Fitness for 5 genes in Pseudomonas simiae WCS417

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500 ntPS417_27860 and PS417_27865 are separated by 221 nucleotidesPS417_27865 and PS417_27870 are separated by 8 nucleotidesPS417_27870 and PS417_27875 are separated by 127 nucleotidesPS417_27875 and PS417_27880 are separated by 117 nucleotides PS417_27860: PS417_27860 - energy transducer TonB, at 6,004,968 to 6,005,717 _27860 PS417_27865: PS417_27865 - LysR family transcriptional regulator, at 6,005,939 to 6,006,859 _27865 PS417_27870: PS417_27870 - ATP-dependent DNA helicase RecG, at 6,006,868 to 6,008,943 _27870 PS417_27875: PS417_27875 - histidine kinase, at 6,009,071 to 6,010,471 _27875 PS417_27880: PS417_27880 - helicase, at 6,010,589 to 6,010,963 _27880
Group Condition PS417_27860 PS417_27865 PS417_27870 PS417_27875 PS417_27880
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 N.D. -7.6 -2.9 -0.2 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. -7.7 -4.1 +1.6 N.D.
soil soil sample 7; outgrowth in LB N.D. -6.5 -3.1 -0.2 N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 N.D. -5.3 -2.9 -1.0 N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 N.D. -2.1 -5.8 -1.2 N.D.
soil soil sample 5; outgrowth in LB N.D. -6.1 -1.9 -1.1 N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 N.D. -6.0 -1.7 -1.3 N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 N.D. -5.6 -3.1 -0.1 N.D.
solid stress Fraxetin 3 mM; solid stress N.D. -5.4 -4.3 +1.1 N.D.
solid stress Fraxetin 3 mM; solid stress N.D. -6.5 -2.7 +0.9 N.D.
solid stress Fraxetin 1 mM; solid stress N.D. -4.6 -4.1 +0.5 N.D.
liquid stress Fraxetin 3 mM; liquid stress N.D. -6.4 -2.5 +1.0 N.D.
liquid stress Fraxetin 2 mM; liquid stress N.D. -6.1 -3.8 +2.2 N.D.
liquid stress Fraxetin 3 mM; liquid stress N.D. -6.4 -2.2 +1.0 N.D.
solid stress Fraxetin 3 mM; solid stress N.D. -5.2 -3.2 +0.8 N.D.
solid stress Fraxetin 1 mM; solid stress N.D. -6.6 -1.7 +0.8 N.D.
agar plate interaction control Taped volatile agar plate with no fungus N.D. -5.5 -3.7 +1.8 N.D.
liquid stress Fraxetin 3 mM; liquid stress N.D. -6.3 -2.2 +1.1 N.D.
soil soil sample 4; outgrowth in LB N.D. -6.2 -2.1 +1.0 N.D.
soil soil sample 2; outgrowth in LB N.D. -6.3 -2.7 +1.8 N.D.
soil soil sample 3; outgrowth in LB N.D. -6.1 -2.0 +1.0 N.D.
liquid stress Fraxetin 3 mM; liquid stress N.D. -6.4 -1.9 +1.4 N.D.
stress methylglyoxal 0.032 vol% N.D. -2.7 -5.5 +1.5 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. -6.3 -1.9 +1.8 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. -7.8 -0.7 +2.4 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. -4.0 -3.6 +1.6 N.D.
soil soil sample 8; outgrowth in LB N.D. -6.4 -1.5 +2.0 N.D.
liquid stress Fraxetin 2 mM; liquid stress N.D. -5.9 -2.2 +2.8 N.D.
liquid stress Fraxetin 2 mM; liquid stress N.D. -5.5 -1.7 +3.0 N.D.
liquid stress Fraxetin 2 mM; liquid stress N.D. -5.2 -2.0 +3.3 N.D.
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